{
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  "Package": "artoo",
  "Title": "Lossless CDISC-Native Input and Output for Clinical Datasets",
  "Version": "0.1.1",
  "Authors@R": "person(\"Vignesh\", \"Thanikachalam\", , \"about.vignesh@gmail.com\",\nrole = c(\"aut\", \"cre\", \"cph\"))",
  "Description": "Reads and writes clinical-trial datasets losslessly across\n'SAS' XPORT (XPT), Clinical Data Interchange Standards\nConsortium (CDISC) Dataset-JSON, and 'Apache Parquet', applying\na specification to produce submission-ready Study Data\nTabulation Model (SDTM) and Analysis Data Model (ADaM)\ndatasets. A single canonical metadata model carries labels,\nCDISC data types, lengths, 'SAS' display formats,\ncontrolled-terminology references, and sort keys identically\nacross every format, so conversion between any two formats is\nlossless by construction. Pure 'R' and lightweight, with no\nexternal 'SAS' or 'Java' runtime. Implements the published\nformat specifications for CDISC Dataset-JSON\n(<https://cdisc-org.github.io/DataExchange-DatasetJson/doc/dataset-json1-1.html>)\nand 'SAS' XPORT\n(<https://www.loc.gov/preservation/digital/formats/fdd/fdd000466.shtml>).",
  "License": "MIT + file LICENSE",
  "URL": "https://vthanik.github.io/artoo/, https://github.com/vthanik/artoo",
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  "Maintainer": "Vignesh Thanikachalam <about.vignesh@gmail.com>",
  "Repository": "https://cran.r-universe.dev",
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    "spec_datasets",
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    "write_spec",
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      "title": "Bundled CDISC specifications (ADaM and SDTM)",
      "object": "adam_spec",
      "class": [
        "artoo::artoo_spec",
        "S7_object"
      ],
      "fields": [],
      "table": false,
      "tojson": false
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      "title": "Demo adverse events analysis dataset (ADaM ADAE)",
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        "SITEID",
        "USUBJID",
        "TRTA",
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        "AOCCSFL",
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      "table": true,
      "tojson": true
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      ],
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        "label",
        "standard"
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      "table": true,
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      "title": "CDISC demo specification tables (one standard per pair)",
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      ],
      "fields": [
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        "variable",
        "label",
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        "order",
        "codelist_id"
      ],
      "rows": 48,
      "table": true,
      "tojson": true
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      "title": "Demo subject-level analysis dataset (ADaM ADSL)",
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        "TRT01PN",
        "TRT01A",
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        "AGEGR1",
        "AGEGR1N",
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        "ITTFL",
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        "DURDIS",
        "DURDSGR1",
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        "DCDECOD",
        "DCREASCD",
        "MMSETOT"
      ],
      "rows": 60,
      "table": true,
      "tojson": true
    },
    {
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      "title": "CDISC demo specification tables (one standard per pair)",
      "object": "cdisc_codelists",
      "class": [
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      ],
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        "term",
        "decode",
        "order"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "cdisc_dm",
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      "object": "cdisc_dm",
      "class": [
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      ],
      "fields": [
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        "DOMAIN",
        "USUBJID",
        "SUBJID",
        "RFSTDTC",
        "RFENDTC",
        "RFXSTDTC",
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        "DMDY"
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      "table": true,
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      "class": [
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      "table": true,
      "tojson": true
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      "title": "Demo trial summary dataset (SDTM TS)",
      "object": "cdisc_ts",
      "class": [
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      ],
      "fields": [
        "STUDYID",
        "DOMAIN",
        "TSSEQ",
        "TSPARMCD",
        "TSPARM",
        "TSVAL"
      ],
      "rows": 33,
      "table": true,
      "tojson": true
    },
    {
      "name": "cdisc_vs",
      "title": "Demo vital signs dataset (SDTM VS)",
      "object": "cdisc_vs",
      "class": [
        "data.frame"
      ],
      "fields": [
        "STUDYID",
        "DOMAIN",
        "USUBJID",
        "VSSEQ",
        "VSTESTCD",
        "VSTEST",
        "VSPOS",
        "VSORRES",
        "VSORRESU",
        "VSSTRESC",
        "VSSTRESN",
        "VSSTRESU",
        "VSSTAT",
        "VSLOC",
        "VSBLFL",
        "VISITNUM",
        "VISIT",
        "VISITDY",
        "VSDTC",
        "VSDY",
        "VSTPT",
        "VSTPTNUM",
        "VSELTM",
        "VSTPTREF"
      ],
      "rows": 60,
      "table": true,
      "tojson": true
    },
    {
      "name": "sdtm_spec",
      "title": "Bundled CDISC specifications (ADaM and SDTM)",
      "object": "sdtm_spec",
      "class": [
        "artoo::artoo_spec",
        "S7_object"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
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    {
      "page": "apply_spec",
      "title": "Conform a data frame to its spec",
      "topics": [
        "apply_spec"
      ]
    },
    {
      "page": "artoo_checks",
      "title": "Control which conformance checks run",
      "topics": [
        "artoo_checks"
      ]
    },
    {
      "page": "artoo_encodings",
      "title": "Encodings for clinical datasets, across R, SAS, and Python",
      "topics": [
        "artoo_encodings"
      ]
    },
    {
      "page": "artoo_formats",
      "title": "Report which formats are available",
      "topics": [
        "artoo_formats"
      ]
    },
    {
      "page": "artoo_spec",
      "title": "Construct a CDISC specification",
      "topics": [
        "artoo_spec"
      ]
    },
    {
      "page": "cdisc_adae",
      "title": "Demo adverse events analysis dataset (ADaM ADAE)",
      "topics": [
        "cdisc_adae"
      ]
    },
    {
      "page": "cdisc_adsl",
      "title": "Demo subject-level analysis dataset (ADaM ADSL)",
      "topics": [
        "cdisc_adsl"
      ]
    },
    {
      "page": "cdisc_dm",
      "title": "Demo demographics dataset (SDTM DM)",
      "topics": [
        "cdisc_dm"
      ]
    },
    {
      "page": "cdisc_spec",
      "title": "CDISC demo specification tables (one standard per pair)",
      "topics": [
        "cdisc_adam_datasets",
        "cdisc_adam_variables",
        "cdisc_codelists",
        "cdisc_sdtm_datasets",
        "cdisc_sdtm_variables",
        "cdisc_spec"
      ]
    },
    {
      "page": "cdisc_specs",
      "title": "Bundled CDISC specifications (ADaM and SDTM)",
      "topics": [
        "adam_spec",
        "cdisc_specs",
        "sdtm_spec"
      ]
    },
    {
      "page": "cdisc_suppdm",
      "title": "Demo supplemental qualifiers dataset (SDTM SUPPDM)",
      "topics": [
        "cdisc_suppdm"
      ]
    },
    {
      "page": "cdisc_ts",
      "title": "Demo trial summary dataset (SDTM TS)",
      "topics": [
        "cdisc_ts"
      ]
    },
    {
      "page": "cdisc_vs",
      "title": "Demo vital signs dataset (SDTM VS)",
      "topics": [
        "cdisc_vs"
      ]
    },
    {
      "page": "check_spec",
      "title": "Check a dataset against its spec",
      "topics": [
        "check_spec"
      ]
    },
    {
      "page": "check_study",
      "title": "Check a whole study against its spec",
      "topics": [
        "check_study"
      ]
    },
    {
      "page": "columns",
      "title": "View a dataset's variable attributes, SAS-style",
      "topics": [
        "columns"
      ]
    },
    {
      "page": "conformance",
      "title": "Read the conformance findings a dataset carries",
      "topics": [
        "conformance"
      ]
    },
    {
      "page": "decode_column",
      "title": "Derive or translate a variable through its codelist",
      "topics": [
        "decode_column"
      ]
    },
    {
      "page": "get_meta",
      "title": "Read the metadata a dataset carries",
      "topics": [
        "get_meta"
      ]
    },
    {
      "page": "is_artoo_checks",
      "title": "Test for a artoo_checks control",
      "topics": [
        "is_artoo_checks"
      ]
    },
    {
      "page": "is_artoo_meta",
      "title": "Test for a artoo_meta object",
      "topics": [
        "is_artoo_meta"
      ]
    },
    {
      "page": "is_artoo_spec",
      "title": "Test for a artoo_spec object",
      "topics": [
        "is_artoo_spec"
      ]
    },
    {
      "page": "members",
      "title": "List the datasets in a file or directory",
      "topics": [
        "members"
      ]
    },
    {
      "page": "read_dataset",
      "title": "Read a dataset from any supported format",
      "topics": [
        "read_dataset"
      ]
    },
    {
      "page": "read_json",
      "title": "Read a dataset from CDISC Dataset-JSON",
      "topics": [
        "read_json"
      ]
    },
    {
      "page": "read_ndjson",
      "title": "Read a dataset from CDISC Dataset-JSON NDJSON",
      "topics": [
        "read_ndjson"
      ]
    },
    {
      "page": "read_parquet",
      "title": "Read a dataset from Apache Parquet",
      "topics": [
        "read_parquet"
      ]
    },
    {
      "page": "read_rds",
      "title": "Read a dataset from rds",
      "topics": [
        "read_rds"
      ]
    },
    {
      "page": "read_spec",
      "title": "Read a specification from JSON, Excel, or Define-XML",
      "topics": [
        "read_spec"
      ]
    },
    {
      "page": "read_xpt",
      "title": "Read a dataset from SAS XPORT",
      "topics": [
        "read_xpt"
      ]
    },
    {
      "page": "repair_spec",
      "title": "Repair a spec from its conformance findings",
      "topics": [
        "repair_spec"
      ]
    },
    {
      "page": "set_meta",
      "title": "Attach metadata to a dataset",
      "topics": [
        "set_meta"
      ]
    },
    {
      "page": "set_type",
      "title": "Override a variable's dataType in a spec",
      "topics": [
        "set_type"
      ]
    },
    {
      "page": "spec_codelists",
      "title": "Codelist terms",
      "topics": [
        "spec_codelists"
      ]
    },
    {
      "page": "spec_comments",
      "title": "Comment definitions in a spec",
      "topics": [
        "spec_comments"
      ]
    },
    {
      "page": "spec_datasets",
      "title": "Dataset names in a spec",
      "topics": [
        "spec_datasets"
      ]
    },
    {
      "page": "spec_documents",
      "title": "Document references in a spec",
      "topics": [
        "spec_documents"
      ]
    },
    {
      "page": "spec_keys",
      "title": "Sort keys for a dataset",
      "topics": [
        "spec_keys"
      ]
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