{
  "_id": "6adb2ec509e55c8400208794",
  "Package": "arkhaia",
  "Title": "Archaeological and Historical Analysis",
  "Version": "0.5.5",
  "Date": "2026-04-11",
  "Authors@R": "person(c(\"Stephen\", \"A.\"), \"Collins-Elliott\", , \"sce@utk.edu\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-5642-6903\"))",
  "Description": "Tools for quantitative analysis related to archaeological\nand historical problems for irregularly spaced time indexed\nobservations, toward evaluating linear dependence and\nhomogeneity over time. Methods include effect sizes for\nmeasuring homogeneity, simulation from a truncated Poisson\ndistribution for random right-censoring of count data, and\nleast-squares spectral analysis by lowest frequency iteration\nfor model fitting. Collins-Elliott (2026)\n<https://volweb.utk.edu/~scolli46/sce_aqysuppl2026.pdf>.",
  "License": "GPL (>= 3)",
  "RdMacros": "Rdpack",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "knitr",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-10-23 09:48:57 UTC",
    "User": "root"
  },
  "Author": "Stephen A. Collins-Elliott [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-5642-6903>)",
  "Maintainer": "Stephen A. Collins-Elliott <sce@utk.edu>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2026-05-05 18:50:23 UTC",
  "RemoteUrl": "https://github.com/cran/arkhaia",
  "RemoteRef": "HEAD",
  "RemoteSha": "4910060efd966881008a163e310f908092a04d62",
  "_user": "cran",
  "_type": "src",
  "_file": "arkhaia_0.5.5.tar.gz",
  "_fileid": "https://r2.ropensci.org/0caa99c3f03d6c6ebe191627313af05b9419198d60898bf9ef244f43e6eba74b",
  "_filesize": 281541,
  "_sha256": "0caa99c3f03d6c6ebe191627313af05b9419198d60898bf9ef244f43e6eba74b",
  "_expires": "2027-01-31T09:54:11.000Z",
  "_created": "2026-10-23T09:48:57.000Z",
  "_published": "2026-10-23T09:54:13.439Z",
  "_upstream": "https://github.com/cran/arkhaia",
  "_status": "success",
  "_maintainer": {
    "name": "Stephen A. Collins-Elliott",
    "email": "sce@utk.edu",
    "login": "scollinselliott",
    "description": "Roman archaeologist.\n\nDepartment of Classics, University of Tennessee, Knoxville.",
    "uuid": 15184533,
    "orcid": "0000-0002-5642-6903"
  },
  "_jobs": [
    {
      "job": 120351143778,
      "time": 117,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12493556271"
    },
    {
      "job": 120351143775,
      "time": 137,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12492124524"
    },
    {
      "job": 120351143824,
      "time": 108,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12492024620"
    },
    {
      "job": 120351143734,
      "time": 141,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12493038327"
    },
    {
      "job": 120349757651,
      "time": 204,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12492549628"
    },
    {
      "job": 120351143595,
      "time": 93,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12493306226"
    },
    {
      "job": 120351143754,
      "time": 225,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12492503995"
    },
    {
      "job": 120351143682,
      "time": 186,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12493950073"
    },
    {
      "job": 120351143693,
      "time": 264,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12493227603"
    },
    {
      "job": 120351143683,
      "time": 108,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12491999655"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906",
  "_commit": {
    "id": "4910060efd966881008a163e310f908092a04d62",
    "author": "Stephen A. Collins-Elliott <sce@utk.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.5.5\n",
    "time": 1778007023
  },
  "_distro": "resolute",
  "_host": "GitHub-Actions",
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.1.0",
      "role": "Imports"
    },
    {
      "package": "Rdpack",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-19",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "0.5.5",
      "date": "2026-05-05"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "scollinselliott",
      "count": 1,
      "uuid": 15184533
    }
  ],
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "followers": 634,
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 381,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/arkhaia"
  },
  "_searchresults": 4,
  "_topics": [
    "openblas",
    "cpp",
    "openmp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/arkhaia.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_homeurl": "https://github.com/scollinselliott/arkhaia",
  "_realowner": "scollinselliott",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.5.5",
      "date": "2026-05-05"
    }
  ],
  "_exports": [
    "CR",
    "homogeneity",
    "homogeneity_LOO",
    "log_OR_pair",
    "LSSA",
    "LSSA_LFI",
    "LSSA_LFI_candidates",
    "LSSA_LFI_epoch",
    "LSSA_LFI_model",
    "LSSA_LFI_pairwise",
    "LSSA_LFI_validated",
    "model_select",
    "pa_matrix",
    "pois_rcens",
    "trace_pair",
    "trim_epoch",
    "trunc_pois",
    "VB",
    "VB_LOO_type",
    "VB_pair",
    "VB_trunc_pois"
  ],
  "_help": [
    {
      "page": "CR",
      "title": "Cressie-Read Power-Divergence Statistic",
      "topics": [
        "CR",
        "CR.data.frame",
        "CR.matrix",
        "CR.table",
        "CR.xtabs"
      ]
    },
    {
      "page": "homogeneity",
      "title": "Homogeneity of Related Assemblages via Effect Size",
      "topics": [
        "homogeneity",
        "homogeneity.effect_sizes"
      ]
    },
    {
      "page": "homogeneity_LOO",
      "title": "Leave-One-Out Routine for Homogeneity of Related Assemblages",
      "topics": [
        "homogeneity_LOO",
        "homogeneity_LOO.data.frame",
        "homogeneity_LOO.matrix",
        "homogeneity_LOO.table",
        "homogeneity_LOO.xtabs"
      ]
    },
    {
      "page": "log_OR_pair",
      "title": "Log Odds Ratio with Haldane-Anscombe's Correction Pairwise between Columns",
      "topics": [
        "log_OR_pair",
        "log_OR_pair.data.frame",
        "log_OR_pair.matrix",
        "log_OR_pair.table",
        "log_OR_pair.xtabs"
      ]
    },
    {
      "page": "LSSA",
      "title": "Least Squares Spectral Analysis (LSSA)",
      "topics": [
        "LSSA",
        "LSSA.data.frame",
        "LSSA.matrix"
      ]
    },
    {
      "page": "LSSA_LFI",
      "title": "Least Squares Spectral Analysis via Lowest Frequency Iteration (LSSA-LFI)",
      "topics": [
        "LSSA_LFI",
        "LSSA_LFI.data.frame",
        "LSSA_LFI.matrix"
      ]
    },
    {
      "page": "LSSA_LFI_candidates",
      "title": "Linear Dependence of LSSA-LFI Candidate Models via AIC",
      "topics": [
        "LSSA_LFI_candidates",
        "LSSA_LFI_candidates.list"
      ]
    },
    {
      "page": "LSSA_LFI_epoch",
      "title": "Period-Variable Pairwise Selection of Linearlly Dependent LSSA-LFI Models",
      "topics": [
        "LSSA_LFI_epoch"
      ]
    },
    {
      "page": "LSSA_LFI_model",
      "title": "LSSA-LFI Model",
      "topics": [
        "LSSA_LFI_model",
        "LSSA_LFI_model.data.frame",
        "LSSA_LFI_model.matrix"
      ]
    },
    {
      "page": "LSSA_LFI_pairwise",
      "title": "Pairwise Selection of Linearlly Dependent LSSA-LFI Models",
      "topics": [
        "LSSA_LFI_pairwise",
        "LSSA_LFI_pairwise.list"
      ]
    },
    {
      "page": "LSSA_LFI_validated",
      "title": "Validated Linear Dependence via LSSA-LFI",
      "topics": [
        "LSSA_LFI_validated",
        "LSSA_LFI_validated.list"
      ]
    },
    {
      "page": "model_select",
      "title": "Model Selection of LSSA-LFI Candidates",
      "topics": [
        "model_select",
        "model_select.LSSA_LFI_AIC"
      ]
    },
    {
      "page": "pa_matrix",
      "title": "Presence-Absence Matrix",
      "topics": [
        "pa_matrix",
        "pa_matrix.data.frame",
        "pa_matrix.matrix",
        "pa_matrix.table",
        "pa_matrix.xtabs"
      ]
    },
    {
      "page": "pois_rcens",
      "title": "Least Squares Fit of Poisson Distribution for Random Right-Censored Data",
      "topics": [
        "pois_rcens",
        "pois_rcens.data.frame",
        "pois_rcens.matrix",
        "pois_rcens.table",
        "pois_rcens.xtabs"
      ]
    },
    {
      "page": "trace_pair",
      "title": "Trace Coefficient Pairwise between Columns",
      "topics": [
        "trace_pair",
        "trace_pair.data.frame",
        "trace_pair.matrix",
        "trace_pair.table",
        "trace_pair.xtabs"
      ]
    },
    {
      "page": "trim_epoch",
      "title": "Trim to Epoch",
      "topics": [
        "trim_epoch",
        "trim_epoch.data.frame",
        "trim_epoch.matrix"
      ]
    },
    {
      "page": "trunc_pois",
      "title": "Resampled Contingency Table via a Truncated Poisson for Random Right-Censored Data",
      "topics": [
        "trunc_pois",
        "trunc_pois.data.frame",
        "trunc_pois.matrix",
        "trunc_pois.table",
        "trunc_pois.xtabs"
      ]
    },
    {
      "page": "VB",
      "title": "Bias-Corrected Cramer's V",
      "topics": [
        "VB",
        "VB.data.frame",
        "VB.matrix",
        "VB.table",
        "VB.xtabs"
      ]
    },
    {
      "page": "VB_LOO_type",
      "title": "Leave-One-Out Type Routine for Pairwise Effect Sizes of Archaeological Contexts",
      "topics": [
        "VB_LOO_type",
        "VB_LOO_type.data.frame",
        "VB_LOO_type.matrix",
        "VB_LOO_type.table",
        "VB_LOO_type.xtabs"
      ]
    },
    {
      "page": "VB_pair",
      "title": "Bias-Corrected Cramer's V Pairwise between Columns",
      "topics": [
        "VB_pair",
        "VB_pair.data.frame",
        "VB_pair.matrix",
        "VB_pair.table",
        "VB_pair.xtabs"
      ]
    },
    {
      "page": "VB_trunc_pois",
      "title": "Bias-Corrected Cramer's V for Random Right-Censored Data",
      "topics": [
        "VB_trunc_pois",
        "VB_trunc_pois.data.frame",
        "VB_trunc_pois.matrix",
        "VB_trunc_pois.table",
        "VB_trunc_pois.xtabs"
      ]
    }
  ],
  "_readme": "https://github.com/cran/arkhaia/raw/HEAD/README.md",
  "_rundeps": [
    "rbibutils",
    "Rcpp",
    "RcppArmadillo",
    "Rdpack"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    },
    {
      "shlib": "libgomp",
      "package": "libgomp1",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "openmp",
      "homepage": "http://gcc.gnu.org/",
      "description": "GCC OpenMP (GOMP) support library"
    }
  ],
  "_vignettes": [
    {
      "source": "homogeneity-for-depositional-contexts.Rmd",
      "filename": "homogeneity-for-depositional-contexts.html",
      "title": "Measures of Homogeneity for Depositional Contexts",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Measures of Homogeneity",
        "Count Data",
        "Presence/Absence Data"
      ],
      "created": "2026-05-05 18:50:23",
      "modified": "2026-05-05 18:50:23",
      "commits": 1
    },
    {
      "source": "homogeneity-for-use-contexts.Rmd",
      "filename": "homogeneity-for-use-contexts.html",
      "title": "Measures of Homogeneity for Use Contexts",
      "engine": "knitr::rmarkdown",
      "headings": [],
      "created": "2026-05-05 18:50:23",
      "modified": "2026-05-05 18:50:23",
      "commits": 1
    }
  ],
  "_score": 3,
  "_indexed": false,
  "_nocasepkg": "arkhaia",
  "_universes": [
    "cran"
  ],
  "_indexurl": "https://scollinselliott.r-universe.dev/arkhaia",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5.5",
      "date": "2026-10-23T09:50:48.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/fdb5153fd649bb6521a6f4b5663f4080f0c76bb31ba634ee222da4bd66004082",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5.5",
      "date": "2026-10-23T09:50:57.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/8a73a099dc4abd5f1ac52cfd3a2d0ee8c6b9842240cc306f9abfa582e7f273ee",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.5.5",
      "date": "2026-10-23T09:50:41.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/ab2fa17f00c3cc84b8f54032be24f1257d1d661c20112b8f13f7ee16d6f8e732",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.5.5",
      "date": "2026-10-23T09:51:07.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/50be411cb79ce899e188dbe1aa647279886726915a17f0ba19f5f6f89b704c5b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.5.5",
      "date": "2026-10-23T09:50:54.000Z",
      "arch": "emscripten",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/e451293b7a796e39f86b13b81279695a945325c44e420baaa1dbd83068600067",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.5.5",
      "date": "2026-10-23T09:52:20.000Z",
      "arch": "aarch64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/e682538faaf9f3100b95690f0531824e6fd5ed8d39a64f1ecb9f2aac76622722",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.5.5",
      "date": "2026-10-23T09:50:14.000Z",
      "arch": "x86_64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/550608b82a1f2aca095566a5be51c2828c70238dbba9a9dd262c44b8095ff64a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.5.5",
      "date": "2026-10-23T09:52:56.000Z",
      "arch": "aarch64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/51de55768fbea3a52866f42ef1ab56f084f38f8d6f8f5584e5223b0ccc4b16c2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.5.5",
      "date": "2026-10-23T09:50:07.000Z",
      "arch": "x86_64",
      "commit": "4910060efd966881008a163e310f908092a04d62",
      "fileid": "https://r2.ropensci.org/6df50bb6e175227a0235ed241c6ca90bb9a52c4c83b8df209118931d024d932f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/39934198906"
    }
  ]
}