{ "_id": "6a1ff31bb401979e73442a73", "Package": "afmToolkit", "Title": "Functions for Atomic Force Microscope Force-Distance Curves\nAnalysis", "Version": "1.0.0", "Authors@R": "c(person(given = \"Rafael\",\nfamily = \"Benitez\",\nrole = c(\"aut\", \"cre\"),\nemail = \"rabesua@uv.es\"),\nperson(given = c(\"Vicente\", \"Jose\"),\nfamily = \"Bolos\",\nrole = \"aut\"),\nperson(given = \"Jose-Luis\",\nfamily = \"Toca-Herrera\",\nrole = \"aut\"))", "Maintainer": "Rafael Benitez ", "Description": "Set of functions for analyzing Atomic Force Microscope\n(AFM) force-distance curves. It allows to obtain the contact\nand unbinding points, perform the baseline correction, estimate\nthe Young's modulus, fit up to two exponential decay function\nto a stress-relaxation / creep experiment, obtain adhesion\nenergies. These operations can be done either over a single F-d\ncurve or over a set of F-d curves in batch mode.", "License": "GPL", "LazyData": "true", "RoxygenNote": "7.3.3", "Encoding": "UTF-8", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-03 09:22:36 UTC", "User": "root" }, "Author": "Rafael Benitez [aut, cre], Vicente Jose Bolos [aut], Jose-Luis\nToca-Herrera [aut]", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2025-09-23 10:40:08 UTC", "RemoteUrl": "https://github.com/cran/afmToolkit", "RemoteRef": "HEAD", "RemoteSha": "820056491798333d7ac48b5b4be34092d682b94c", "MD5sum": "8b42948122c6f3fc77ef2036b3728025", "_user": "cran", "_type": "src", "_file": "afmToolkit_1.0.0.tar.gz", "_fileid": "6cf12381fb9a5643cb3054fc446ab2a3394b59f35338525b1203610a3c4d799a", "_filesize": 4583395, "_sha256": "6cf12381fb9a5643cb3054fc446ab2a3394b59f35338525b1203610a3c4d799a", "_created": "2026-06-03T09:22:36.000Z", "_published": "2026-06-03T09:25:47.109Z", "_distro": "noble", "_jobs": [ { "job": 79262276419, "time": 124, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7380653726" }, { "job": 79262276563, "time": 148, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7380662114" }, { "job": 79261714991, "time": 191, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7380605955" }, { "job": 79262276405, "time": 106, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7380646703" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/26875518157", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/afmToolkit", "_commit": { "id": "820056491798333d7ac48b5b4be34092d682b94c", "author": "Rafael Benitez ", "committer": "cran-robot ", "message": "version 1.0.0\n", "time": 1758624008 }, "_maintainer": { "name": "Rafael Benitez", "email": "rabesua@uv.es" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.2.2", "role": "Depends" }, { "package": "ggplot2", "role": "Depends" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "minpack.lm", "role": "Imports" }, { "package": "grid", "role": "Imports" }, { "package": "gridExtra", "role": "Imports" }, { "package": "scales", "role": "Imports" }, { "package": "dplyr", "role": "Imports" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-39", "n": 1 } ], "_tags": [ { "name": "1.0.0", "date": "2025-09-23" } ], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 210, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/afmToolkit" }, "_searchresults": 20, "_rbuild": "4.6.0", "_assets": [ "extra/afmToolkit.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "manual.pdf" ], "_realowner": "cran", "_cranurl": false, "_releases": [ { "version": "0.0.1", "date": "2017-04-03" }, { "version": "1.0.0", "date": "2025-09-23" } ], "_exports": [ "afmAdhesionEnergy", "afmBaselineCorrection", "afmContactPoint", "afmdata", "afmDetachPoint", "afmexperiment", "afmExtract", "afmHysteresis", "afmIndentation", "afmReadJPK", "afmReadJPKFolder", "afmReadJPKMultiFolder", "afmReadJPKMultiIndent", "afmReadVeeco", "afmReadVeecoFolder", "afmRelax", "afmYoungModulus", "afmZeroPointSlope", "append.afmdata", "is.afmdata", "is.afmexperiment", "is.afmmulti", "windowedFit" ], "_datasets": [ { "name": "batchExperiment", "title": "Example of an afmexperiment data class.", "object": "batchExperiment", "class": [ "afmexperiment" ], "fields": [], "table": false, "tojson": false } ], "_help": [ { "page": "afmAdhesionEnergy", "title": "Adhesion Energy", "topics": [ "afmAdhesionEnergy" ] }, { "page": "afmBaselineCorrection", "title": "Performs a baseline correction to an AFM F-z curve", "topics": [ "afmBaselineCorrection" ] }, { "page": "afmContactPoint", "title": "Contact point", "topics": [ "afmContactPoint" ] }, { "page": "afmdata", "title": "AFM data", "topics": [ "afmdata" ] }, { "page": "afmDetachPoint", "title": "Detach point", "topics": [ "afmDetachPoint" ] }, { "page": "afmexperiment", "title": "AFM experiment", "topics": [ "afmexperiment" ] }, { "page": "afmExtract", "title": "Extract computed parameters from an afmexperiment", "topics": [ "afmExtract" ] }, { "page": "afmHysteresis", "title": "Hysteresis", "topics": [ "afmHysteresis" ] }, { "page": "afmIndentation", "title": "afmIndentation", "topics": [ "afmIndentation" ] }, { "page": "afmReadJPK", "title": "Read Nanowizard JPK ascii file", "topics": [ "afmReadJPK" ] }, { "page": "afmReadJPKFolder", "title": "Read all Nanowizard JPK ascii files in a folder", "topics": [ "afmReadJPKFolder" ] }, { "page": "afmReadJPKMultiFolder", "title": "Read all Nanowizard Multi-indentation JPK ascii files in a folder", "topics": [ "afmReadJPKMultiFolder" ] }, { "page": "afmReadJPKMultiIndent", "title": "Read Nanowizard JPK ascii file containing a multi-indentation experiment", "topics": [ "afmReadJPKMultiIndent" ] }, { "page": "afmReadVeeco", "title": "Read Bruke Nanoscope Veeco ascii file", "topics": [ "afmReadVeeco" ] }, { "page": "afmReadVeecoFolder", "title": "Read all Bruke Nanoscope Veeco ascii files in a folder", "topics": [ "afmReadVeecoFolder" ] }, { "page": "afmRelax", "title": "Stress relaxation/ Creep model fit", "topics": [ "afmRelax" ] }, { "page": "afmStitch", "title": "Stitch the files of a Bruker experiment", "topics": [ "afmStitch" ] }, { "page": "afmYoungModulus", "title": "afmYoungModulus", "topics": [ "afmYoungModulus" ] }, { "page": "afmZeroPointSlope", "title": "Zero Force Point and Slope", "topics": [ "afmZeroPointSlope" ] }, { "page": "append.afmdata", "title": "Append to an 'afmdata' list.", "topics": [ "append.afmdata" ] }, { "page": "batchExperiment", "title": "Example of an afmexperiment data class.", "topics": [ "batchExperiment" ] }, { "page": "is.afmdata", "title": "Afmdata check.", "topics": [ "is.afmdata" ] }, { "page": "is.afmexperiment", "title": "Afmexperiment check.", "topics": [ "is.afmexperiment" ] }, { "page": "is.afmmulti", "title": "Afmdata multiindentation check.", "topics": [ "is.afmmulti" ] }, { "page": "plot.afmdata", "title": "Plot an afmdata object", "topics": [ "plot.afmdata" ] }, { "page": "summary", "title": "Summary of an 'afmdata' class object.", "topics": [ "summary.afmdata" ] }, { "page": "windowedFit", "title": "Linear fit in a running window", "topics": [ "windowedFit" ] } ], "_rundeps": [ "cli", "cpp11", "dplyr", "farver", "generics", "ggplot2", "glue", "gridExtra", "gtable", "isoband", "labeling", "lifecycle", "magrittr", "minpack.lm", "pillar", "pkgconfig", "R6", "RColorBrewer", "rlang", "S7", "scales", "tibble", "tidyselect", "utf8", "vctrs", "viridisLite", "withr" ], "_score": 1.3010299956639813, "_indexed": true, "_nocasepkg": "afmtoolkit", "_universes": [ "cran" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.0", "date": "2026-06-03T09:24:26.000Z", "distro": "noble", "commit": "820056491798333d7ac48b5b4be34092d682b94c", "fileid": "9ee40afee5517ffcea5083ba09058aa9ece6fc0d416469f3262ff6fefea22b1a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/26875518157" }, { "r": "4.6.0", "os": "linux", "version": "1.0.0", "date": "2026-06-03T09:24:51.000Z", "distro": "noble", "commit": "820056491798333d7ac48b5b4be34092d682b94c", "fileid": "6760593739fae2a180d066847746eb654fedf468b96512f4c490bc8be88a6984", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/26875518157" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.0", "date": "2026-06-03T09:24:46.000Z", "commit": "820056491798333d7ac48b5b4be34092d682b94c", "fileid": "d766ce497a15d8ae330d231ff2c2581da5b19f42ffd99e871f668ae54fc53662", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/26875518157" } ] }