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  "Package": "VDAP",
  "Type": "Package",
  "Title": "Peptide Array Analysis Tools",
  "Version": "2.0.0",
  "Date": "2016-04-26",
  "Author": "Cody Moore",
  "Maintainer": "Cody Moore <Jumper9400@gmail.com>",
  "Description": "Analyze Peptide Array Data and characterize peptide\nsequence space. Allows for high level visualization of global\nsignal, Quality control based on replicate correlation and/or\nrelative Kd, calculation of peptide Length/Charge/Kd\nparameters, Hits selection based on RFU Signal, and amino acid\ncomposition/basic motif recognition with RFU signal weighting.\nBasic signal trends can be used to generate peptides that\nfollow the observed compositional trends.",
  "License": "GPL-2",
  "NeedsCompilation": "no",
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    "User": "root"
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  "Date/Publication": "2016-05-22 22:54:19 UTC",
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    "extra/citation.html",
    "extra/citation.json",
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    "aaDist",
    "aaStruct",
    "Attrib",
    "Dups",
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    {
      "page": "aaDist",
      "title": "Position Independent Amino Acid Distributions",
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    {
      "page": "aaStruct",
      "title": "Positional Amino Acid Composition Calculations",
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      "title": "Calculate Peptide Length and Charge Attributes",
      "topics": [
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      ]
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      "title": "Average duplicated peptides from a VDAP dataset",
      "topics": [
        "Dups"
      ]
    },
    {
      "page": "genPep",
      "title": "Peptide generator based on the output of functions 'vComp' or 'vMotif'",
      "topics": [
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      ]
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      "title": "Signal Based Hits Selection for VDAP",
      "topics": [
        "hitSel"
      ]
    },
    {
      "page": "KdA",
      "title": "Peptide Dissociation Rate Constant (Kd) Calculations",
      "topics": [
        "KdA"
      ]
    },
    {
      "page": "lcScan",
      "title": "Signal or Kd Distributions separated by Length/Charge attributes",
      "topics": [
        "lcScan"
      ]
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      "title": "Quality Control of Peptides Based on Reproducibility and Kd",
      "topics": [
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      "page": "QCon",
      "title": "Subsetting for VDAP function QCKd",
      "topics": [
        "QCon"
      ]
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    {
      "page": "resSep",
      "title": "Select Peptides with the Specified Amino Acid Residue(s) at an Indicated Position",
      "topics": [
        "resSep"
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    },
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      "page": "vComp",
      "title": "Amino Acid Disbutions by Position at Various Length/Charge",
      "topics": [
        "vComp",
        "vComp.l",
        "vComp.lc"
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    },
    {
      "page": "vFormat",
      "title": "Length/Charge/Kd Peptide Calculations and File Assembly",
      "topics": [
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      ]
    },
    {
      "page": "vMotif",
      "title": "Generate Signal Weighted Amino Acid Heat Maps by Position",
      "topics": [
        "vMotif",
        "vMotif.l",
        "vMotif.lc"
      ]
    },
    {
      "page": "vSep",
      "title": "Select Peptides of a Particular Length/Charge Combination",
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