{
  "_id": "6a105c8facfb0bcc41ca43e6",
  "Package": "TestCor",
  "Title": "FWER and FDR Controlling Procedures for Multiple Correlation\nTests",
  "Version": "0.0.2.2",
  "Date": "2020-09-18",
  "Authors@R": "c(\nperson(\"Gannaz\", \"Irene\", email = \"irene.gannaz@insa-lyon.fr\", role = c(\"aut\",\"cre\")))",
  "Maintainer": "Gannaz Irene <irene.gannaz@insa-lyon.fr>",
  "Description": "Different multiple testing procedures for correlation\ntests are implemented. These procedures were shown to\ntheoretically control asymptotically the Family Wise Error Rate\n(Roux (2018) <https://tel.archives-ouvertes.fr/tel-01971574v1>)\nor the False Discovery Rate (Cai & Liu (2016)\n<doi:10.1080/01621459.2014.999157>). The package gather four\ntest statistics used in correlation testing, four FWER\nprocedures with either single step or stepdown versions, and\nfour FDR procedures.",
  "Encoding": "UTF-8",
  "License": "GPL (>= 2)",
  "RoxygenNote": "7.1.1",
  "NeedsCompilation": "yes",
  "Author": "Gannaz Irene [aut, cre]",
  "Packaged": {
    "Date": "2026-05-09 05:08:45 UTC",
    "User": "root"
  },
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2020-10-15 07:50:02 UTC",
  "RemoteUrl": "https://github.com/cran/TestCor",
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    "author": "Gannaz Irene <irene.gannaz@insa-lyon.fr>",
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    "message": "version 0.0.2.2\n",
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    "name": "Gannaz Irene",
    "email": "irene.gannaz@insa-lyon.fr"
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      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_userbio": {
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    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/TestCor"
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  "_mentions": 1,
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  "_topics": [
    "cpp"
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  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/TestCor.html",
    "manual.pdf"
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      "version": "0.0.0.9",
      "date": "2019-02-08"
    },
    {
      "version": "0.0.1.0",
      "date": "2019-07-07"
    },
    {
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      "date": "2020-01-17"
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  "_exports": [
    "ApplyFdrCor",
    "ApplyFwerCor",
    "ApplyFwerCor_oracle",
    "BHBootCor",
    "BHCor",
    "BonferroniCor",
    "BonferroniCor_SD",
    "BootRWCor",
    "BootRWCor_SD",
    "covD2nd",
    "covDcor",
    "covDcorNorm",
    "eval_stat",
    "LCTboot",
    "LCTnorm",
    "maxTinftyCor",
    "maxTinftyCor_SD",
    "SidakCor",
    "SidakCor_SD",
    "SimuFdr",
    "SimuFwer",
    "SimuFwer_oracle",
    "UncorrectedCor",
    "unvectorize",
    "vectorize",
    "whichCor"
  ],
  "_help": [
    {
      "page": "TestCor-package",
      "title": "FWER and FDR controlling procedures for multiple correlation tests",
      "concept": [
        "multiple testing",
        "FWER",
        "FDR",
        "correlation testing",
        "graph inference"
      ],
      "topics": [
        "TestCor-package",
        "TestCor"
      ]
    },
    {
      "page": "ApplyFdrCor",
      "title": "Applies multiple testing procedures built to control (asymptotically) the FDR for correlation testing.",
      "topics": [
        "ApplyFdrCor"
      ]
    },
    {
      "page": "ApplyFwerCor",
      "title": "Applies multiple testing procedures controlling (asymptotically) the FWER for tests on a correlation matrix.",
      "topics": [
        "ApplyFwerCor"
      ]
    },
    {
      "page": "ApplyFwerCor_oracle",
      "title": "Applies an oracle version of MaxTinfty procedure described in Drton & Perlman (2007) for correlation testing.",
      "topics": [
        "ApplyFwerCor_oracle"
      ]
    },
    {
      "page": "BHBootCor",
      "title": "Benjamini & Hochberg (1995)'s procedure for correlation testing with bootstrap evaluation of p-values.",
      "topics": [
        "BHBootCor"
      ]
    },
    {
      "page": "BHCor",
      "title": "Benjamini & Hochberg (1995)'s procedure for correlation testing.",
      "topics": [
        "BHCor"
      ]
    },
    {
      "page": "BonferroniCor",
      "title": "Bonferroni multiple testing procedure for correlations.",
      "topics": [
        "BonferroniCor"
      ]
    },
    {
      "page": "BonferroniCor_SD",
      "title": "Bonferroni multiple testing method for correlations with stepdown procedure.",
      "topics": [
        "BonferroniCor_SD"
      ]
    },
    {
      "page": "BootRWCor",
      "title": "Bootstrap multiple testing method of Romano & Wolf (2005) for correlations.",
      "topics": [
        "BootRWCor"
      ]
    },
    {
      "page": "BootRWCor_SD",
      "title": "Boootstrap multiple testing method of Romano & Wolf (2005) for correlations, with stepdown procedure.",
      "topics": [
        "BootRWCor_SD"
      ]
    },
    {
      "page": "covD2nd",
      "title": "Returns the theoretical covariance of empirical correlations.",
      "topics": [
        "covD2nd"
      ]
    },
    {
      "page": "covDcor",
      "title": "Returns the theoretical covariance of empirical correlations.",
      "topics": [
        "covDcor"
      ]
    },
    {
      "page": "covDcorNorm",
      "title": "Returns the theoretical covariance of test statistics for correlation testing.",
      "topics": [
        "covDcorNorm"
      ]
    },
    {
      "page": "eval_stat",
      "title": "Evaluates the test statistics for tests on correlation matrix entries.",
      "topics": [
        "eval_stat"
      ]
    },
    {
      "page": "LCTboot",
      "title": "Bootstrap procedure LCT-B proposed by Cai & Liu (2016) for correlation testing.",
      "topics": [
        "LCTboot"
      ]
    },
    {
      "page": "LCTnorm",
      "title": "Procedure LCT-N proposed by Cai & Liu (2016) for correlation testing.",
      "topics": [
        "LCTnorm"
      ]
    },
    {
      "page": "maxTinftyCor",
      "title": "Multiple testing method of Drton & Perlman (2007) for correlations.",
      "topics": [
        "maxTinftyCor"
      ]
    },
    {
      "page": "maxTinftyCor_SD",
      "title": "Multiple testing method of Drton & Perlman (2007) for correlations, with stepdown procedure.",
      "topics": [
        "maxTinftyCor_SD"
      ]
    },
    {
      "page": "SidakCor",
      "title": "Sidak multiple testing procedure for correlations.",
      "topics": [
        "SidakCor"
      ]
    },
    {
      "page": "SidakCor_SD",
      "title": "Sidak multiple testing method for correlations with stepdown procedure.",
      "topics": [
        "SidakCor_SD"
      ]
    },
    {
      "page": "SimuFdr",
      "title": "Simulates Gaussian data with a given correlation matrix and applies a FDR controlling procedure on the correlations.",
      "topics": [
        "SimuFdr"
      ]
    },
    {
      "page": "SimuFwer",
      "title": "Simulates Gaussian data with a given correlation matrix and applies a FWER controlling procedure on the correlations.",
      "topics": [
        "SimuFwer"
      ]
    },
    {
      "page": "SimuFwer_oracle",
      "title": "Simulates Gaussian data with a given correlation matrix and applies oracle MaxTinfty on the correlations.",
      "topics": [
        "SimuFwer_oracle"
      ]
    },
    {
      "page": "UncorrectedCor",
      "title": "Uncorrected testing procedure for correlations.",
      "topics": [
        "UncorrectedCor"
      ]
    },
    {
      "page": "unvectorize",
      "title": "Returns an upper-triangle matrix, without the diagonal, containing the elements of a given vector.",
      "topics": [
        "unvectorize"
      ]
    },
    {
      "page": "vectorize",
      "title": "Returns a vector containing the upper triangle of a matrix, without the diagonal.",
      "topics": [
        "vectorize"
      ]
    },
    {
      "page": "whichCor",
      "title": "Returns the indexes of an upper triangular matrix with logical entries.",
      "topics": [
        "whichCor"
      ]
    }
  ],
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    "Rcpp",
    "RcppArmadillo"
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