{
  "_id": "6a1152ddacfb0bcc41cea9d2",
  "Package": "SoftBart",
  "Type": "Package",
  "Title": "Implements the SoftBart Algorithm",
  "Version": "1.0.3",
  "Authors@R": "person(c(\"Antonio\", \"R.\"), \"Linero\", email = \"antonio.linero@austin.utexas.edu\", role = c(\"aut\", \"cre\"))",
  "Date": "2025-11-23",
  "Encoding": "UTF-8",
  "Description": "Implements the SoftBart model of described by Linero and\nYang (2018) <doi:10.1111/rssb.12293>, with the optional use of\na sparsity-inducing prior to allow for variable selection. For\nusability, the package maintains the same style as the\n'BayesTree' package.",
  "License": "GPL (>= 2)",
  "RoxygenNote": "7.3.2",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-23 07:06:24 UTC",
    "User": "root"
  },
  "Author": "Antonio R. Linero [aut, cre]",
  "Maintainer": "Antonio R. Linero <antonio.linero@austin.utexas.edu>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2025-11-24 04:00:02 UTC",
  "RemoteUrl": "https://github.com/cran/SoftBart",
  "RemoteRef": "HEAD",
  "RemoteSha": "1483d495e112d0e34f8b40a46e6fef02c7fac341",
  "MD5sum": "7ff282778ef954595158c1a65f6e6097",
  "_user": "cran",
  "_type": "src",
  "_file": "SoftBart_1.0.3.tar.gz",
  "_fileid": "3f1a7d2468e3407f7c719b5b6b357e2ce13752dffe95c461dee30ae3bc5369cd",
  "_filesize": 1691042,
  "_sha256": "3f1a7d2468e3407f7c719b5b6b357e2ce13752dffe95c461dee30ae3bc5369cd",
  "_created": "2026-05-23T07:06:24.000Z",
  "_published": "2026-05-23T07:10:21.067Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77505187155,
      "time": 172,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7175190810"
    },
    {
      "job": 77505187163,
      "time": 163,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7175189942"
    },
    {
      "job": 77505187156,
      "time": 173,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7175190962"
    },
    {
      "job": 77505187164,
      "time": 177,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7175191347"
    },
    {
      "job": 77504968909,
      "time": 239,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7175171382"
    },
    {
      "job": 77505187171,
      "time": 127,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7175185986"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/26326439104",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/SoftBart",
  "_commit": {
    "id": "1483d495e112d0e34f8b40a46e6fef02c7fac341",
    "author": "Antonio R. Linero <antonio.linero@austin.utexas.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.0.3\n",
    "time": 1763956802
  },
  "_maintainer": {
    "name": "Antonio R. Linero",
    "email": "antonio.linero@austin.utexas.edu"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 0.12.9",
      "role": "Imports"
    },
    {
      "package": "glmnet",
      "version": ">= 4.0.0",
      "role": "Imports"
    },
    {
      "package": "scales",
      "version": ">= 1.1.1",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "caret",
      "role": "Imports"
    },
    {
      "package": "truncnorm",
      "role": "Imports"
    },
    {
      "package": "progress",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2025-48",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "1.0.3",
      "date": "2025-11-24"
    }
  ],
  "_stars": 0,
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 810,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/SoftBart"
  },
  "_searchresults": 102,
  "_topics": [
    "openblas",
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/SoftBart.html",
    "manual.pdf"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2022-10-12"
    },
    {
      "version": "1.0.1",
      "date": "2022-10-29"
    },
    {
      "version": "1.0.2",
      "date": "2025-05-10"
    },
    {
      "version": "1.0.3",
      "date": "2025-11-24"
    }
  ],
  "_exports": [
    "contr.ltfr",
    "gsoftbart_regression",
    "Hypers",
    "MakeForest",
    "Opts",
    "partial_dependence_probit",
    "partial_dependence_regression",
    "pdsoftbart",
    "posterior_probs",
    "predict.softbart_probit",
    "predict.softbart_regression",
    "preprocess_df",
    "quantile_normalize_bart",
    "rmse",
    "softbart",
    "softbart_probit",
    "softbart_regression",
    "vc_softbart_regression"
  ],
  "_help": [
    {
      "page": "contr.ltfr",
      "title": "Create a Full Set of Dummy Variables",
      "topics": [
        "contr.ltfr"
      ]
    },
    {
      "page": "gsoftbart_regression",
      "title": "General SoftBart Regression",
      "topics": [
        "gsoftbart_regression"
      ]
    },
    {
      "page": "Hypers",
      "title": "Create a list of hyperparameter values",
      "topics": [
        "Hypers"
      ]
    },
    {
      "page": "MakeForest",
      "title": "Create an Rcpp_Forest Object",
      "topics": [
        "MakeForest"
      ]
    },
    {
      "page": "Opts",
      "title": "MCMC options for SoftBart",
      "topics": [
        "Opts"
      ]
    },
    {
      "page": "partial_dependence_probit",
      "title": "Partial Dependence Function for SoftBART Probit Regression",
      "topics": [
        "partial_dependence_probit"
      ]
    },
    {
      "page": "partial_dependence_regression",
      "title": "Partial Dependence Function for SoftBART Regression",
      "topics": [
        "partial_dependence_regression"
      ]
    },
    {
      "page": "pdsoftbart",
      "title": "Partial dependence plots for SoftBart",
      "topics": [
        "pdsoftbart"
      ]
    },
    {
      "page": "posterior_probs",
      "title": "BART Posterior Inclusion Probabilities",
      "topics": [
        "posterior_probs"
      ]
    },
    {
      "page": "predict.softbart_probit",
      "title": "Predict for SoftBart Probit Regression",
      "topics": [
        "predict.softbart_probit"
      ]
    },
    {
      "page": "predict.softbart_regression",
      "title": "Predict for SoftBart Regression",
      "topics": [
        "predict.softbart_regression"
      ]
    },
    {
      "page": "preprocess_df",
      "title": "Preprocess a dataset for use with SoftBart",
      "topics": [
        "preprocess_df"
      ]
    },
    {
      "page": "quantile_normalize_bart",
      "title": "Quantile normalization for predictors",
      "topics": [
        "quantile_normalize_bart"
      ]
    },
    {
      "page": "rmse",
      "title": "Root mean squared error",
      "topics": [
        "rmse"
      ]
    },
    {
      "page": "softbart",
      "title": "Fits the SoftBart model",
      "topics": [
        "softbart"
      ]
    },
    {
      "page": "softbart_probit",
      "title": "SoftBart Probit Regression",
      "topics": [
        "softbart_probit"
      ]
    },
    {
      "page": "softbart_regression",
      "title": "SoftBart Regression",
      "topics": [
        "softbart_regression"
      ]
    },
    {
      "page": "vc_softbart_regression",
      "title": "SoftBart Varying Coefficient Regression",
      "topics": [
        "vc_softbart_regression"
      ]
    }
  ],
  "_rundeps": [
    "caret",
    "class",
    "cli",
    "clock",
    "codetools",
    "cpp11",
    "crayon",
    "data.table",
    "diagram",
    "digest",
    "dplyr",
    "e1071",
    "farver",
    "foreach",
    "future",
    "future.apply",
    "generics",
    "ggplot2",
    "glmnet",
    "globals",
    "glue",
    "gower",
    "gtable",
    "hardhat",
    "hms",
    "ipred",
    "isoband",
    "iterators",
    "KernSmooth",
    "labeling",
    "lattice",
    "lava",
    "lifecycle",
    "listenv",
    "lubridate",
    "magrittr",
    "MASS",
    "Matrix",
    "ModelMetrics",
    "nlme",
    "nnet",
    "numDeriv",
    "parallelly",
    "pillar",
    "pkgconfig",
    "plyr",
    "prettyunits",
    "pROC",
    "prodlim",
    "progress",
    "progressr",
    "proxy",
    "purrr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "recipes",
    "reshape2",
    "rlang",
    "rpart",
    "S7",
    "scales",
    "shape",
    "sparsevctrs",
    "SQUAREM",
    "stringi",
    "stringr",
    "survival",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "timeDate",
    "truncnorm",
    "tzdb",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "SoftBart-Vig.Rnw",
      "filename": "SoftBart-Vig.pdf",
      "title": "SoftBartUsage",
      "engine": "utils::Sweave",
      "headings": [],
      "created": "2022-10-29 06:00:17",
      "modified": "2025-11-24 04:00:02",
      "commits": 2
    }
  ],
  "_score": 3.786751422145561,
  "_indexed": true,
  "_nocasepkg": "softbart",
  "_universes": [
    "cran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-23T07:08:58.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "1483d495e112d0e34f8b40a46e6fef02c7fac341",
      "fileid": "fe041359084bdd08ee3451537b0c476f6a78b79833666132dcd12f280f1fb994",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26326439104"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-23T07:08:47.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "1483d495e112d0e34f8b40a46e6fef02c7fac341",
      "fileid": "eb767670e744bb201b1eb104cc977b6dac8f8adf3ba29a54912f0fd59a5d026d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26326439104"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-23T07:08:59.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "1483d495e112d0e34f8b40a46e6fef02c7fac341",
      "fileid": "dcdc8d28f1760616e44c064c6b06caf4e4d24c6561ea542c99e98b3eac1e9a62",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26326439104"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-23T07:08:56.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "1483d495e112d0e34f8b40a46e6fef02c7fac341",
      "fileid": "39b1e24aa86d54e0379991bf30125e040ec70dc231df1822f9ae1214f81062aa",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26326439104"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.3",
      "date": "2026-05-23T07:09:04.000Z",
      "arch": "emscripten",
      "commit": "1483d495e112d0e34f8b40a46e6fef02c7fac341",
      "fileid": "b8a27152ab5214995741e5fecca636f57b7e998b294e60c589636ccac0c93015",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26326439104"
    }
  ]
}