{
  "_id": "6a140b9cacfb0bcc41d3a786",
  "Package": "STAREG",
  "Type": "Package",
  "Title": "An Empirical Bayes Approach for Replicability Analysis Across\nTwo Studies",
  "Version": "1.0.4",
  "Authors@R": "c(person(\"Yan Li\", role = c(\"aut\", \"cre\", \"cph\"), email = \"yanli_@jlu.edu.cn\"), person(\"Xiang Zhou\", role = c(\"aut\")), person(\"Rui Chen\", role = c(\"aut\")), person(\"Xianyang Zhang\", role = c(\"aut\")), person(\"Hongyuan Cao\", role = c(\"aut\", \"ctb\")))",
  "Description": "A robust and powerful empirical Bayesian approach is\ndeveloped for replicability analysis of two large-scale\nexperimental studies. The method controls the false discovery\nrate by using the joint local false discovery rate based on the\nreplicability null as the test statistic. An EM algorithm\ncombined with a shape constraint nonparametric method is used\nto estimate unknown parameters and functions. [Li, Y. et al.,\n(2024), <doi:10.1371/journal.pgen.1011423>].",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.2.3",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-25 08:39:58 UTC",
    "User": "root"
  },
  "Author": "Yan Li [aut, cre, cph], Xiang Zhou [aut], Rui Chen [aut],\nXianyang Zhang [aut], Hongyuan Cao [aut, ctb]",
  "Maintainer": "Yan Li <yanli_@jlu.edu.cn>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2025-05-30 12:30:02 UTC",
  "RemoteUrl": "https://github.com/cran/STAREG",
  "RemoteRef": "HEAD",
  "RemoteSha": "4dcbd73149abe89a5f1d388c669b9262b836beed",
  "MD5sum": "601c2ff880f37aa3b8f60ac8d6a03b08",
  "_user": "cran",
  "_type": "src",
  "_file": "STAREG_1.0.4.tar.gz",
  "_fileid": "71d3ce98ca77b2fed9391733401dacd852292683122a302f07fe959806ab2315",
  "_filesize": 84453,
  "_sha256": "71d3ce98ca77b2fed9391733401dacd852292683122a302f07fe959806ab2315",
  "_created": "2026-05-25T08:39:58.000Z",
  "_published": "2026-05-25T08:43:08.156Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77682616202,
      "time": 145,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7194805788"
    },
    {
      "job": 77682616213,
      "time": 135,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7194802444"
    },
    {
      "job": 77682616220,
      "time": 127,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194800721"
    },
    {
      "job": 77682616190,
      "time": 146,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194805625"
    },
    {
      "job": 77682208239,
      "time": 176,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194766539"
    },
    {
      "job": 77682616178,
      "time": 129,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7194800928"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/26391534071",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/STAREG",
  "_commit": {
    "id": "4dcbd73149abe89a5f1d388c669b9262b836beed",
    "author": "Yan Li <yanli_@jlu.edu.cn>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.0.4\n",
    "time": 1748608202
  },
  "_maintainer": {
    "name": "Yan Li",
    "email": "yanli_@jlu.edu.cn"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rcpp",
      "version": ">= 1.0.9",
      "role": "Depends"
    },
    {
      "package": "qvalue",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-22",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "1.0.4",
      "date": "2025-05-30"
    }
  ],
  "_stars": 0,
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 563,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/STAREG"
  },
  "_searchresults": 4,
  "_topics": [
    "openblas",
    "cpp",
    "openmp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/STAREG.html",
    "manual.pdf"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2023-06-13"
    },
    {
      "version": "1.0.1",
      "date": "2023-06-16"
    },
    {
      "version": "1.0.2",
      "date": "2023-06-29"
    },
    {
      "version": "1.0.3",
      "date": "2023-08-15"
    },
    {
      "version": "1.0.4",
      "date": "2025-05-30"
    }
  ],
  "_exports": [
    "em_lfdr",
    "stareg"
  ],
  "_help": [
    {
      "page": "em_lfdr",
      "title": "EM algorithm to estimate local false discovery rate",
      "topics": [
        "em_lfdr"
      ]
    },
    {
      "page": "stareg",
      "title": "An empirical Bayes approach for replicability analysis across two studies",
      "topics": [
        "stareg"
      ]
    }
  ],
  "_rundeps": [
    "cli",
    "cpp11",
    "farver",
    "ggplot2",
    "glue",
    "gtable",
    "isoband",
    "labeling",
    "lifecycle",
    "magrittr",
    "plyr",
    "qvalue",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "reshape2",
    "rlang",
    "S7",
    "scales",
    "stringi",
    "stringr",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    },
    {
      "shlib": "libgomp",
      "package": "libgomp1",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "openmp",
      "homepage": "http://gcc.gnu.org/",
      "description": "GCC OpenMP (GOMP) support library"
    }
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "stareg",
  "_universes": [
    "cran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-05-25T08:42:27.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "4dcbd73149abe89a5f1d388c669b9262b836beed",
      "fileid": "3de63a90e6b5e713c90f9e72e13ba70529608343e340d2f617c05c5d2bff4a4e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26391534071"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-05-25T08:42:18.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "4dcbd73149abe89a5f1d388c669b9262b836beed",
      "fileid": "9f9a62c8d24cd26f6c9d6b7f783794415cd6eb487e93bcc1107a5b18b7daca6e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26391534071"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-05-25T08:42:08.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "4dcbd73149abe89a5f1d388c669b9262b836beed",
      "fileid": "750e5981d763181fc90eb31164a398ba132b7bcc3452990525d53a4a1e1cac7b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26391534071"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-05-25T08:42:21.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "4dcbd73149abe89a5f1d388c669b9262b836beed",
      "fileid": "2a9f8f71d942d901122fe3544c122d5fe1002cc97e9015cf1bf605ce075b73e1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26391534071"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.4",
      "date": "2026-05-25T08:42:30.000Z",
      "arch": "emscripten",
      "commit": "4dcbd73149abe89a5f1d388c669b9262b836beed",
      "fileid": "52f94bac1503221ad2e52135fa46563edbc4288c89f380967c215653ab27170c",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26391534071"
    }
  ]
}