{ "_id": "6a2a93fb7b7a29ca6004e13d", "Package": "SPECIES", "Type": "Package", "Title": "Statistical Package for Species Richness Estimation", "Version": "1.2.0", "Date": "2024-09-22", "Authors@R": "c(person(\"Ji-Ping\", \"Wang\",role=c(\"aut\",\"cre\"),\nemail=\"jzwang@northwestern.edu\"))", "Author": "Ji-Ping Wang [aut, cre]", "Maintainer": "Ji-Ping Wang ", "Description": "Implementation of various methods in estimation of species\nrichness or diversity in Wang\n(2011).", "License": "GPL-2", "Packaged": { "Date": "2026-06-11 10:52:36 UTC", "User": "root" }, "NeedsCompilation": "yes", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2024-09-24 03:00:09 UTC", "RemoteUrl": "https://github.com/cran/SPECIES", "RemoteRef": "HEAD", "RemoteSha": "13bb3370581f6e8e35455655f366d3866ba95705", "MD5sum": "ad2512d6297dabaa6ae847a89bed057c", "_user": "cran", "_type": "src", "_file": "SPECIES_1.2.0.tar.gz", "_fileid": "89b7640da6f5e3d73072f93ddaff82a8ec8b3feb298405b3b52131fbc61664e8", "_filesize": 186996, "_sha256": "89b7640da6f5e3d73072f93ddaff82a8ec8b3feb298405b3b52131fbc61664e8", "_created": "2026-06-11T10:52:36.000Z", "_published": "2026-06-11T10:54:51.759Z", "_distro": "noble", "_jobs": [ { "job": 80780183467, "time": 98, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7562104306" }, { "job": 80780183474, "time": 107, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7562107358" }, { "job": 80780183473, "time": 101, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7562105272" }, { "job": 80780183483, "time": 104, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7562106409" }, { "job": 80779785159, "time": 140, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7562069525" }, { "job": 80780183409, "time": 93, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7562102646" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/27341633267", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/SPECIES", "_commit": { "id": "13bb3370581f6e8e35455655f366d3866ba95705", "author": "Ji-Ping Wang ", "committer": "cran-robot ", "message": "version 1.2.0\n", "time": 1727146809 }, "_maintainer": { "name": "Ji-Ping Wang", "email": "jzwang@northwestern.edu", "login": "jipingw", "description": "Professor in Statistics and Data Science, Adjunct Professor of Molecular BioSciences. My research interest is in interface of statistics and bi-medical sciences", "uuid": 45120092 }, "_registered": true, "_dependencies": [], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "jipingw", "count": 4, "uuid": 45120092 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 309, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/SPECIES" }, "_mentions": 25, "_searchresults": 82, "_topics": [ "glibc" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/SPECIES.html", "manual.pdf" ], "_realowner": "jipingw", "_cranurl": false, "_releases": [ { "version": "1.0", "date": "2011-04-24" }, { "version": "1.1.3", "date": "2022-04-25" }, { "version": "1.1.4", "date": "2023-08-20" }, { "version": "1.2.0", "date": "2024-09-23" } ], "_exports": [ "chao1984", "ChaoBunge", "ChaoLee1992", "jackknife", "pcg", "pnpmle", "unpmle" ], "_datasets": [ { "name": "butterfly", "title": "Fisher's butterfly data", "object": "butterfly", "file": "butterfly.rda", "class": [ "data.frame" ], "fields": [ "j", "n_j" ], "rows": 25, "table": true, "tojson": true }, { "name": "cottontail", "title": "Cottontail data", "object": "cottontail", "file": "cottontail.rda", "class": [ "data.frame" ], "fields": [ "j", "n_j" ], "rows": 7, "table": true, "tojson": true }, { "name": "EST", "title": "EST data", "object": "EST", "file": "EST.rda", "class": [ "matrix", "array" ], "fields": [ "j", "n_j" ], "rows": 17, "table": true, "tojson": true }, { "name": "insects", "title": "Insects data", "object": "insects", "file": "insects.rda", "class": [ "data.frame" ], "fields": [ "j", "n_j" ], "rows": 6, "table": true, "tojson": true }, { "name": "microbial", "title": "Microbial species data", "object": "microbial", "file": "microbial.rda", "class": [ "data.frame" ], "fields": [ "X1", "X2" ], "rows": 50, "table": true, "tojson": true }, { "name": "traffic", "title": "Traffic data", "object": "traffic", "file": "traffic.rda", "class": [ "matrix", "array" ], "fields": [ "j", "n_j" ], "rows": 7, "table": true, "tojson": true } ], "_help": [ { "page": "SPECIES.package", "title": "An R pacakge for species richness estimation", "topics": [ "SPECIES-package", "SPECIES" ] }, { "page": "butterfly", "title": "Fisher's butterfly data", "topics": [ "butterfly" ] }, { "page": "chao1984", "title": "Lower-bound estimator for species richness", "topics": [ "chao1984" ] }, { "page": "ChaoBunge", "title": "Coverage-duplication estimator for species richness", "topics": [ "ChaoBunge" ] }, { "page": "ChaoLee1992", "title": "Coverage-based estimators for species richness", "topics": [ "ChaoLee1992" ] }, { "page": "cottontail", "title": "Cottontail data", "topics": [ "cottontail" ] }, { "page": "EST", "title": "EST data", "topics": [ "EST" ] }, { "page": "insects", "title": "Insects data", "topics": [ "insects" ] }, { "page": "jackknife", "title": "Jackknife estimator for the species richness", "topics": [ "jackknife" ] }, { "page": "microbial", "title": "Microbial species data", "topics": [ "microbial" ] }, { "page": "pcg", "title": "Poisson-compound Gamma estimator for the species richness", "topics": [ "pcg" ] }, { "page": "pnpmle", "title": "Penalized conditional NPML estimator for species richness", "topics": [ "pnpmle" ] }, { "page": "traffic", "title": "Traffic data", "topics": [ "traffic" ] }, { "page": "unpmle", "title": "Unconditional NPML estimator for the SPECIES number", "topics": [ "unpmle" ] } ], "_rundeps": [], "_sysdeps": [ { "shlib": "libmvec", "package": "libc6", "headers": "libc6-dev", "source": "glibc", "version": "2.39-0ubuntu8.7", "name": "glibc", "homepage": "https://www.gnu.org/software/libc/libc.html", "description": "GNU C Library: Shared libraries" } ], "_score": 2.9138138523837167, "_indexed": false, "_nocasepkg": "species", "_universes": [ "cran" ], "_indexurl": "https://jipingw.r-universe.dev/SPECIES", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.2.0", "date": "2026-06-11T10:54:20.000Z", "distro": "noble", "arch": "aarch64", "commit": "13bb3370581f6e8e35455655f366d3866ba95705", "fileid": "1a248326b1f30b08d37b0dc5e43cce24bc8ce4dfc5beeb7293bb23290f167a4e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27341633267" }, { "r": "4.7.0", "os": "linux", "version": "1.2.0", "date": "2026-06-11T10:54:24.000Z", "distro": "noble", "arch": "x86_64", "commit": "13bb3370581f6e8e35455655f366d3866ba95705", "fileid": "35b8a1409c131aaf2c5f81303e816ad41b121e88d268a79a504680f23b1d1a47", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27341633267" }, { "r": "4.6.0", "os": "linux", "version": "1.2.0", "date": "2026-06-11T10:54:21.000Z", "distro": "noble", "arch": "aarch64", "commit": "13bb3370581f6e8e35455655f366d3866ba95705", "fileid": "ec19d7430d8ef3f92b8c39f325c2a959e6d0559c60c64d9dcd43f624c1dcd868", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27341633267" }, { "r": "4.6.0", "os": "linux", "version": "1.2.0", "date": "2026-06-11T10:54:22.000Z", "distro": "noble", "arch": "x86_64", "commit": "13bb3370581f6e8e35455655f366d3866ba95705", "fileid": "0f6057ffaef0c4baff97300be9a3357b91b0d2e6ff00e6d0af2efa79e0306b5e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27341633267" }, { "r": "4.6.0", "os": "wasm", "version": "1.2.0", "date": "2026-06-11T10:54:23.000Z", "arch": "emscripten", "commit": "13bb3370581f6e8e35455655f366d3866ba95705", "fileid": "9a692d04bd9996b66aa5f9f324abcc4384c8ceb9b9fdc344651d7c2e6ba98750", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/27341633267" } ] }