{ "_id": "6a2141cacd65a98ecbd2a8b1", "Package": "SNPfiltR", "Title": "Interactively Filter SNP Datasets", "Version": "1.0.7", "Authors@R": "person(given = \"Devon\",\nfamily = \"DeRaad\",\nrole = c(\"aut\", \"cre\"),\nemail = \"devonderaad@gmail.com\",\ncomment = c(ORCID = \"0000-0003-3105-985X\"))", "Description": "Is designed to interactively and reproducibly visualize\nand filter SNP (single-nucleotide polymorphism) datasets. This\nR-based implementation of SNP and genotype filters facilitates\nan interactive and iterative SNP filtering pipeline, which can\nbe documented reproducibly via 'rmarkdown'. 'SNPfiltR' contains\nfunctions for visualizing various quality and missing data\nmetrics for a SNP dataset, and then filtering the dataset based\non user specified cutoffs. All functions take 'vcfR' objects as\ninput, which can easily be generated by reading standard vcf\n(variant call format) files into R using the R package 'vcfR'\nauthored by Knaus and Grünwald (2017)\n. Each 'SNPfiltR' function can\nreturn a newly filtered 'vcfR' object, which can then be\nwritten to a local directory in standard vcf format using the\n'vcfR' package, for downstream population genetic and\nphylogenetic analyses.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.2.3", "VignetteBuilder": "knitr", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-04 09:10:50 UTC", "User": "root" }, "Author": "Devon DeRaad [aut, cre] (ORCID:\n)", "Maintainer": "Devon DeRaad ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2025-09-04 06:40:39 UTC", "RemoteUrl": "https://github.com/cran/SNPfiltR", "RemoteRef": "HEAD", "RemoteSha": "93c0672fd35bdffbbb3594c1d1895f479b85303e", "MD5sum": "75957b6697b82a4ac794a842b9ecf81a", "_user": "cran", "_type": "src", "_file": "SNPfiltR_1.0.7.tar.gz", "_fileid": "2e85de42856451ddee7d7e4ae19eb843a389c98b2f237d337ec41f4d89bfb760", "_filesize": 1476001, "_sha256": 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