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  "Author": "Yiqing Chen [aut, cre]",
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  "Description": "Fits cause-specific random survival forests for flexible\nmultistate survival analysis with covariate-adjusted transition\nprobabilities computed via product-integral. State transitions\nare modeled by random forests. Subject-specific transition\nprobability matrices are assembled from predicted cumulative\nhazards using the product-integral formula. Also provides a\nstandalone Aalen-Johansen nonparametric estimator as a\ncovariate-free baseline. Supports arbitrary state spaces with\nany number of states (three or more) and any set of allowed\ntransitions, applicable to clinical trials, disease\nprogression, reliability engineering, and other domains where\nsubjects move among discrete states over time. Provides\nper-transition feature importance, bias-variance diagnostics,\nand comprehensive visualizations. Handles right censoring and\ncompeting transitions. Methods are described in Ishwaran et al.\n(2008) <doi:10.1214/08-AOAS169> for random survival forests,\nPutter et al. (2007) <doi:10.1002/sim.2712> for multistate\ncompeting risks decomposition, and Aalen and Johansen (1978)\n<https://www.jstor.org/stable/4615704> for the nonparametric\nestimator.",
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    {
      "page": "RFmstate-package",
      "title": "RFmstate: Random Forest-Based Multistate Survival Analysis",
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        "RFmstate-package",
        "RFmstate"
      ]
    },
    {
      "page": "aalen_johansen",
      "title": "Aalen-Johansen Nonparametric Estimator",
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        "aalen_johansen"
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      "page": "clinical_states",
      "title": "Create Clinical Trial Multistate Structure",
      "topics": [
        "clinical_states"
      ]
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    {
      "page": "compute_trans_prob",
      "title": "Compute Transition Probability Matrix via Product-Integral",
      "topics": [
        "compute_trans_prob"
      ]
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    {
      "page": "define_multistate",
      "title": "Define Multistate Structure",
      "topics": [
        "define_multistate"
      ]
    },
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      "title": "Diagnostics for Random Forest Multistate Model",
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        "diagnose.rfmstate"
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      "title": "Feature Importance per Transition",
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      "page": "plot_transition_diagram",
      "title": "Plot Transition Diagram",
      "topics": [
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    },
    {
      "page": "plot.aj_estimate",
      "title": "Plot Aalen-Johansen Estimates",
      "topics": [
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    },
    {
      "page": "plot.rfmstate_diag",
      "title": "Plot Diagnostics",
      "topics": [
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    {
      "page": "plot.rfmstate_importance",
      "title": "Plot Feature Importance",
      "topics": [
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    {
      "page": "plot.rfmstate_pred",
      "title": "Plot RF Multistate Predictions",
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      "title": "Predict Transition Probabilities for New Data",
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      "title": "Prepare Data for Multistate Analysis",
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      "page": "rfmstate",
      "title": "Fit Random Forest Multistate Model",
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      "title": "Simulate Clinical Trial Multistate Data",
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      "title": "Summary of Random Forest Multistate Model",
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        "Quick Start",
        "1. Define the Multistate Structure",
        "2. Simulate Data",
        "3. Prepare Multistate Data",
        "4. Aalen-Johansen Nonparametric Baseline",
        "5. Fit Random Forest Model",
        "6. Model Summary",
        "7. Feature Importance",
        "8. Predict for New Patients",
        "9. Diagnostics",
        "10. Transition Diagram",
        "Methodology",
        "Product-Integral Framework",
        "Aalen-Johansen Estimator (Nonparametric Baseline)",
        "Random Forest Multistate Approach",
        "Diagnostics",
        "References"
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      "modified": "2026-03-11 16:40:16",
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