{ "_id": "6adb48f11206290b6ab76afa", "Package": "PLNmodels", "Title": "Poisson Lognormal Models", "Version": "1.3.2", "Authors@R": "c(\nperson(\"Julien\", \"Chiquet\", , \"julien.chiquet@inrae.fr\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-3629-3429\")),\nperson(\"Mahendra\", \"Mariadassou\", , \"mahendra.mariadassou@inrae.fr\", role = \"aut\",\ncomment = c(ORCID = \"0000-0003-2986-354X\")),\nperson(\"Stéphane\", \"Robin\", , \"stephane.robin@inrae.fr\", role = \"aut\"),\nperson(\"François\", \"Gindraud\", , \"francois.gindraud@gmail.com\", role = \"ctb\"),\nperson(\"Julie\", \"Aubert\", , \"julie.aubert@inrae.fr\", role = \"ctb\"),\nperson(\"Bastien\", \"Batardière\", , \"bastien.batardiere@inrae.fr\", role = \"ctb\"),\nperson(\"Giovanni\", \"Poggiato\", , \"giov.poggiato@gmail.com\", role = \"ctb\"),\nperson(\"Cole\", \"Trapnell\", , \"coletrap@uw.edu\", role = \"ctb\"),\nperson(\"Maddy\", \"Duran\", , \"duran@uw.edu\", role = \"ctb\"),\nperson(\"Ryan\", \"Friedman\", , \"ryanfriedman22@gmail.com\", role = \"ctb\")\n)", "Description": "The Poisson-lognormal model and variants (Chiquet,\nMariadassou and Robin, 2021 ) can\nbe used for a variety of multivariate problems when count data\nare at play, including principal component analysis for count\ndata, discriminant analysis, model-based clustering and network\ninference. Implements variational algorithms to fit such models\naccompanied with a set of functions for visualization and\ndiagnostic.", "URL": "https://pln-team.github.io/PLNmodels/", "BugReports": "https://github.com/pln-team/PLNmodels/issues", "License": "GPL (>= 3)", "VignetteBuilder": "knitr", "biocViews": "", "Encoding": "UTF-8", "Language": "en-US", "LazyData": "true", "Collate": "'PLNfit-class.R' 'PLN.R' 'PLNLDA.R' 'PLNLDAfit-S3methods.R'\n'PLNLDAfit-class.R' 'PLNPCA.R' 'PLNPCAfamily-S3methods.R'\n'PLNfamily-class.R' 'PLNPCAfamily-class.R'\n'PLNPCAfit-S3methods.R' 'PLNPCAfit-class.R'\n'PLNfamily-S3methods.R' 'PLNfit-S3methods.R' 'PLNmixture.R'\n'PLNmixturefamily-S3methods.R' 'PLNmixturefamily-class.R'\n'PLNmixturefit-S3methods.R' 'PLNmixturefit-class.R'\n'PLNmodels-package.R' 'PLNnetwork.R'\n'PLNnetworkfamily-S3methods.R' 'PLNnetworkfamily-class.R'\n'PLNnetworkfit-S3methods.R' 'PLNnetworkfit-class.R'\n'RcppExports.R' 'ZIPLNfit-class.R' 'ZIPLN.R'\n'ZIPLNfit-S3methods.R' 'ZIPLNnetwork.R' 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