{
  "_id": "6ae86634818c9e3ef6dbdd6d",
  "Package": "PJFM",
  "Type": "Package",
  "Title": "Variational Inference for High-Dimensional Joint Frailty Model",
  "Version": "0.1.0",
  "Authors@R": "person(given = \"Jiehuan\",\nfamily = \"Sun\",\nrole = c(\"aut\", \"cre\"),\nemail = \"jiehuan.sun@gmail.com\")",
  "Maintainer": "Jiehuan Sun <jiehuan.sun@gmail.com>",
  "Description": "Joint frailty models have been widely used to study the\nassociations between recurrent events and a survival outcome.\nHowever, existing joint frailty models only consider one or a\nfew recurrent events and cannot deal with high-dimensional\nrecurrent events. This package can be used to fit our recently\ndeveloped penalized joint frailty model that can handle\nhigh-dimensional recurrent events. Specifically, an adaptive\nlasso penalty is imposed on the parameters for the effects of\nthe recurrent events on the survival outcome, which allows for\nvariable selection. Also, our algorithm is computationally\nefficient, which is based on the Gaussian variational\napproximation method.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.3.1",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-11-02 10:24:51 UTC",
    "User": "root"
  },
  "Author": "Jiehuan Sun [aut, cre]",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2024-11-06 21:00:06 UTC",
  "RemoteUrl": "https://github.com/cran/PJFM",
  "RemoteRef": "HEAD",
  "RemoteSha": "d14a7805e636c5448fb56ceb4f4753e455e65337",
  "_user": "cran",
  "_type": "src",
  "_file": "PJFM_0.1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/c7f9aec420b005418370ebdb8506d4bd88b357c11574c1612399477daaa80aea",
  "_filesize": 588883,
  "_sha256": "c7f9aec420b005418370ebdb8506d4bd88b357c11574c1612399477daaa80aea",
  "_expires": "2027-02-10T10:30:10.000Z",
  "_created": "2026-11-02T10:24:51.000Z",
  "_published": "2026-11-02T10:30:12.679Z",
  "_upstream": "https://github.com/cran/PJFM",
  "_status": "success",
  "_maintainer": {
    "name": "Jiehuan Sun",
    "email": "jiehuan.sun@gmail.com",
    "login": "jjr1234",
    "description": "",
    "uuid": 65307685
  },
  "_jobs": [
    {
      "job": 125221520019,
      "time": 115,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13132863407"
    },
    {
      "job": 125221519977,
      "time": 140,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13132339193"
    },
    {
      "job": 125221520026,
      "time": 142,
      "config": "linux-release-arm64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13133926424"
    },
    {
      "job": 125221519983,
      "time": 176,
      "config": "linux-release-x86_64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13132719083"
    },
    {
      "job": 125220156527,
      "time": 182,
      "config": "source",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13133900513"
    },
    {
      "job": 125221519966,
      "time": 99,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "13133840702"
    },
    {
      "job": 125221519962,
      "time": 241,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13133003530"
    },
    {
      "job": 125221519937,
      "time": 186,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13133441316"
    },
    {
      "job": 125221519981,
      "time": 234,
      "config": "windows-release-arm64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13133531472"
    },
    {
      "job": 125221520154,
      "time": 142,
      "config": "windows-release-x86_64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13133217507"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003",
  "_commit": {
    "id": "d14a7805e636c5448fb56ceb4f4753e455e65337",
    "author": "Jiehuan Sun <jiehuan.sun@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.0\n",
    "time": 1730926806
  },
  "_distro": "resolute",
  "_host": "GitHub-Actions",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.6.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "RcppEnsmallen",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.0.0",
      "role": "Imports"
    },
    {
      "package": "survival",
      "version": ">= 3.2",
      "role": "Imports"
    },
    {
      "package": "statmod",
      "version": ">= 1.4",
      "role": "Imports"
    },
    {
      "package": "pracma",
      "version": ">= 2.2",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "version": ">= 1.3",
      "role": "Imports"
    },
    {
      "package": "splines",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "jjr1234",
      "count": 1,
      "uuid": 65307685
    }
  ],
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "followers": 635,
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 303,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/PJFM"
  },
  "_searchresults": 0,
  "_topics": [
    "openblas",
    "cpp"
  ],
  "_abi": {
    "exports": [],
    "imports": [
      {
        "key": "Rcpp::Rcpp_precious_preserve()",
        "hash": "33a97ea62b293da6"
      },
      {
        "key": "Rcpp::Rcpp_precious_remove()",
        "hash": "63d26947ba7e1377"
      },
      {
        "key": "Rcpp::dataptr()",
        "hash": "54e69ad2e6668c83"
      },
      {
        "key": "Rcpp::demangle()",
        "hash": "b0cfd6754c5ebc4e"
      },
      {
        "key": "Rcpp::enterRNGScope()",
        "hash": "a04a299137cef947"
      },
      {
        "key": "Rcpp::exitRNGScope()",
        "hash": "a04a299137cef947"
      },
      {
        "key": "Rcpp::rcpp_get_stack_trace()",
        "hash": "c684a9bbe15cdc52"
      },
      {
        "key": "Rcpp::rcpp_set_stack_trace()",
        "hash": "33a97ea62b293da6"
      }
    ]
  },
  "_rbuild": "4.6.2",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/PJFM.html"
  ],
  "_realowner": "jjr1234",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2024-11-06"
    }
  ],
  "_exports": [
    "PJFM_fit",
    "PJFM_prediction",
    "PJFM_summary"
  ],
  "_datasets": [
    {
      "name": "RecurData",
      "title": "Simulated Recurrent Events Data",
      "object": "PJFMdata",
      "class": [
        "data.frame"
      ],
      "fields": [
        "ID",
        "feature_id",
        "time"
      ],
      "rows": 57582,
      "table": true,
      "tojson": true
    },
    {
      "name": "SurvData",
      "title": "Simulated Survival Data",
      "object": "PJFMdata",
      "class": [
        "data.frame"
      ],
      "fields": [
        "ID",
        "fstat",
        "ftime",
        "x"
      ],
      "rows": 300,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "control_list",
      "title": "control_list",
      "topics": [
        "control_list"
      ]
    },
    {
      "page": "PJFM_fit",
      "title": "The function to fit PJFM.",
      "topics": [
        "PJFM_fit"
      ]
    },
    {
      "page": "PJFM_prediction",
      "title": "The function to calculate predicted probabilities",
      "topics": [
        "PJFM_prediction"
      ]
    },
    {
      "page": "PJFM_summary",
      "title": "The function to get summary table of PJFM fit.",
      "topics": [
        "PJFM_summary"
      ]
    },
    {
      "page": "RecurData",
      "title": "Simulated Recurrent Events Data",
      "topics": [
        "RecurData"
      ]
    },
    {
      "page": "SurvData",
      "title": "Simulated Survival Data",
      "topics": [
        "SurvData"
      ]
    }
  ],
  "_rundeps": [
    "lattice",
    "Matrix",
    "pracma",
    "Rcpp",
    "RcppArmadillo",
    "RcppEnsmallen",
    "statmod",
    "survival"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 1,
  "_indexed": false,
  "_nocasepkg": "pjfm",
  "_universes": [
    "cran"
  ],
  "_indexurl": "https://jjr1234.r-universe.dev/PJFM",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-11-02T10:26:38.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/0679f2d91e48c66a8febb9814d31d632b133a63707972a08fdb344914941222d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-11-02T10:27:08.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/51f1ed350e9a07149e713ee5baa45c38cd9283e97861472926fb9b66fc9aee29",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.6.2",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-11-02T10:27:10.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/0955b14680e348d06a20ef4704381f16076d4ee086675c30ae070edb130a01b2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.6.2",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-11-02T10:27:29.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/807f59113199f375f866fa1ca360a6d4e8e99724a25b9e8b56a65722320b12de",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-11-02T10:26:53.000Z",
      "arch": "emscripten",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/e4517be254d8e670fa3680dddb932da819f02ea20e8743b6d3d1090d6f25e777",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-11-02T10:28:32.000Z",
      "arch": "aarch64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/9b338988719456be325a0e92d51e1ac17b3db878392dfe4e4ed76648b489dabc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-11-02T10:26:23.000Z",
      "arch": "x86_64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/961fbcd8244039f0675ebd1d66f8fe65a090b129f4cc73889eaefa530275f9c5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.6.2",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-11-02T10:28:33.000Z",
      "arch": "aarch64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/f0f8a39ccf0ef1a65f89b541a03a04a0e2376a8bfe0a1fed629c17642fc07961",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    },
    {
      "r": "4.6.2",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-11-02T10:26:29.000Z",
      "arch": "x86_64",
      "commit": "d14a7805e636c5448fb56ceb4f4753e455e65337",
      "fileid": "https://r2.ropensci.org/7a9223cf6779aa3c0c49af6d2f6191386d28736f6abe2eb2f464a8412659ba20",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/41428228003"
    }
  ]
}