{ "_id": "6a1f20b2b401979e7342042b", "Package": "OTrecod", "Title": "Data Fusion using Optimal Transportation Theory", "Version": "0.1.2", "Authors@R": "c(\nperson(given = \"Gregory\" , family = \"Guernec\" , role = c(\"aut\",\"cre\"), email = \"otrecod.pkg@gmail.com\"),\nperson(given = \"Valerie\" , family = \"Gares\" , role = \"aut\", email = \"otrecod.pkg@gmail.com\"),\nperson(given = \"Pierre\" , family = \"Navaro\" , role = \"ctb\"),\nperson(given = \"Jeremy\" , family = \"Omer\" , role = \"ctb\"),\nperson(given = \"Philippe\", family = \"Saint-Pierre\", role = \"ctb\"),\nperson(given = \"Nicolas\" , family = \"Savy\" , role = \"ctb\"))", "Maintainer": "Gregory Guernec ", "Description": "In the context of data fusion, the package provides a set\nof functions dedicated to the solving of 'recoding problems'\nusing optimal transportation theory (Gares, Guernec, Savy\n(2019) and Gares, Omer (2020)\n). From two databases with\nno overlapping part except a subset of shared variables, the\nfunctions of the package assist users until obtaining a unique\nsynthetic database, where the missing information is fully\ncompleted.", "License": "GPL-3", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.2.0", "VignetteBuilder": "knitr", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-16 07:32:44 UTC", "User": "root" }, "Author": "Gregory Guernec [aut, cre], Valerie Gares [aut], Pierre Navaro\n[ctb], Jeremy Omer [ctb], Philippe Saint-Pierre [ctb], Nicolas\nSavy [ctb]", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2022-10-05 09:40:02 UTC", "RemoteUrl": "https://github.com/cran/OTrecod", "RemoteRef": "HEAD", "RemoteSha": "81f1653d795e2b6b994f828cf48dcdec829e5ef5", "MD5sum": "129dba8f10fb44b742f6a7594ea02932", "_user": "cran", "_type": "src", "_file": "OTrecod_0.1.2.tar.gz", "_fileid": "85aaa7f6273d2bf545760b258f12c28f118aa18b9c9ad323861a9e3be50366e1", "_filesize": 666573, "_sha256": "85aaa7f6273d2bf545760b258f12c28f118aa18b9c9ad323861a9e3be50366e1", "_created": "2026-05-16T07:32:44.000Z", "_published": "2026-06-02T18:28:02.717Z", "_distro": "noble", "_jobs": [ { "job": 79143100190, "time": 237, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "7031634682" }, { "job": 79143100389, "time": 235, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "7031634589" }, { "job": 79143098982, "time": 299, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7031609565" }, { "job": 79143099060, "time": 163, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7366447206" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/25956153348", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/OTrecod", "_commit": { "id": "81f1653d795e2b6b994f828cf48dcdec829e5ef5", "author": "Gregory Guernec ", "committer": "cran-robot ", "message": "version 0.1.2\n", "time": 1664962802 }, "_maintainer": { "name": "Gregory Guernec", "email": "otrecod.pkg@gmail.com" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5", "role": "Depends" }, { "package": "stats", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "mice", "role": "Imports" }, { "package": "missMDA", "role": "Imports" }, { "package": "plyr", "role": "Imports" }, { "package": "FactoMineR", "role": "Imports" }, { "package": "StatMatch", "role": "Imports" }, { "package": "proxy", "role": "Imports" }, { "package": "rdist", "role": "Imports" }, { "package": "ROI", "role": "Imports" }, { "package": "ROI.plugin.glpk", "role": "Imports" }, { "package": "ompr", "role": "Imports" }, { "package": "ompr.roi", "role": "Imports" }, { "package": "party", "role": "Imports" }, { "package": "vcd", "role": "Imports" }, { "package": "testthat", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "covr", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 230, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/OTrecod" }, "_searchresults": 20, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/OTrecod.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_realowner": "cran", "_cranurl": false, "_releases": [ { "version": "0.1.0", "date": "2021-01-29" }, { "version": "0.1.1", "date": "2021-09-20" }, { "version": "0.1.2", "date": "2022-10-05" } ], "_exports": [ "avg_dist_closest", "compare_lists", "error_group", "ham", "imput_cov", "indiv_grp_closest", "indiv_grp_optimal", "merge_dbs", "OT_joint", "OT_outcome", "power_set", "proxim_dist", "select_pred", "transfo_dist", "transfo_quali", "transfo_target", "verif_OT" ], "_datasets": [ { "name": "api29", "title": "Student performance in California schools: the results of the county 29", "object": "api29", "class": [ "data.frame" ], "fields": [ "cds", "apicl_2000", "stype", "awards", "acs.core", "api.stu", "acs.k3.20", "grad.sch", "ell", "mobility", "meals", "full" ], "rows": 418, "table": true, "tojson": true }, { "name": "api35", "title": "Student performance in California schools: the results of the county 35", "object": "api35", "class": [ "data.frame" ], "fields": [ "cds", "apicl_1999", "stype", "awards", "acs.core", "api.stu", "acs.k3.20", "grad.sch", "ell", "mobility", "meals", "full" ], "rows": 362, "table": true, "tojson": true }, { "name": "ncds_14", "title": "National Child Development Study: a sample of the first four waves of data collection", "object": "ncds_14", "class": [ "data.frame" ], "fields": [ "ncdsid", "GO90", "health", "employ", "gender", "study" ], "rows": 5476, "table": true, "tojson": true }, { "name": "ncds_5", "title": "National Child Development Study: a sample of the fifth wave of data collection", "object": "ncds_5", "class": [ "data.frame" ], "fields": [ "ncdsid", "gender", "RG91", "health", "employ", "study" ], "rows": 365, "table": true, "tojson": true }, { "name": "simu_data", "title": "A simulated dataset to test the functions of the OTrecod package", "object": "simu_data", "class": [ "data.frame" ], "fields": [ "DB", "Yb1", "Yb2", "Gender", "Treatment", "Dosage", "Smoking", "Age" ], "rows": 700, "table": true, "tojson": true }, { "name": "tab_test", "title": "A simulated dataset to test the library", "object": "tab_test", "class": [ "data.frame" ], "fields": [ "ident", "Y1", "Y2", "X1", "X2", "X3" ], "rows": 10000, "table": true, "tojson": true } ], "_help": [ { "page": "api29", "title": "Student performance in California schools: the results of the county 29", "topics": [ "api29" ] }, { "page": "api35", "title": "Student performance in California schools: the results of the county 35", "topics": [ "api35" ] }, { "page": "avg_dist_closest", "title": "avg_dist_closest()", "topics": [ "avg_dist_closest" ] }, { "page": "compare_lists", "title": "compare_lists()", "topics": [ "compare_lists" ] }, { "page": "error_group", "title": "error_group()", "topics": [ "error_group" ] }, { "page": "ham", "title": "ham()", "topics": [ "ham" ] }, { "page": "imput_cov", "title": "imput_cov()", "topics": [ "imput_cov" ] }, { "page": "indiv_grp_closest", "title": "indiv_grp_closest()", "topics": [ "indiv_grp_closest" ] }, { "page": "indiv_grp_optimal", "title": "indiv_grp_optimal()", "topics": [ "indiv_grp_optimal" ] }, { "page": "merge_dbs", "title": "merge_dbs()", "topics": [ "merge_dbs" ] }, { "page": "ncds_14", "title": "National Child Development Study: a sample of the first four waves of data collection", "topics": [ "ncds_14" ] }, { "page": "ncds_5", "title": "National Child Development Study: a sample of the fifth wave of data collection", "topics": [ "ncds_5" ] }, { "page": "OT_joint", "title": "OT_joint()", "topics": [ "OT_joint" ] }, { "page": "OT_outcome", "title": "OT_outcome()", "topics": [ "OT", "OT_outcome", "ot_outcome" ] }, { "page": "power_set", "title": "power_set()", "topics": [ "power_set" ] }, { "page": "proxim_dist", "title": "proxim_dist()", "topics": [ "proxim_dist" ] }, { "page": "select_pred", "title": "select_pred()", "topics": [ "select_pred" ] }, { "page": "simu_data", "title": "A simulated dataset to test the functions of the OTrecod package", "topics": [ "simu_data" ] }, { "page": "tab_test", "title": "A simulated dataset to test the library", "topics": [ "tab_test" ] }, { "page": "transfo_dist", "title": "transfo_dist()", "topics": [ "transfo_dist" ] }, { "page": "transfo_quali", "title": "transfo_quali()", "topics": [ "transfo_quali" ] }, { "page": "transfo_target", "title": "transfo_target()", "topics": [ "transfo_target" ] }, { "page": "verif_OT", "title": "verif_OT()", "topics": [ "verif_OT" ] } ], "_readme": "https://github.com/cran/OTrecod/raw/HEAD/README.md", "_rundeps": [ "abind", "backports", "base64enc", "bit", "bit64", "boot", "broom", "bslib", "cachem", "car", "carData", "checkmate", "cli", "clipr", "cluster", "codetools", "coin", "colorspace", "cowplot", "cpp11", "crayon", "crosstalk", "data.table", "DBI", "Deriv", "digest", "doBy", "doParallel", "dplyr", "DT", "ellipse", "emmeans", "estimability", "evaluate", "FactoMineR", "farver", "fastmap", "flashClust", "fontawesome", "forcats", "foreach", "forecast", "Formula", "fracdiff", "fs", "generics", "ggplot2", "ggrepel", "glmnet", "glue", "gtable", "haven", "highr", "hms", "htmltools", "htmlwidgets", "isoband", "iterators", "jomo", "jquerylib", "jsonlite", "knitr", "labeling", "later", "lattice", "lazyeval", "leaps", "libcoin", "lifecycle", "listcomp", "lme4", "lmtest", "lpSolve", "magrittr", "MASS", "Matrix", "MatrixModels", "matrixStats", "memoise", "mgcv", "mice", "microbenchmark", "mime", "minqa", "missMDA", "mitml", "mitools", "modelr", "modeltools", "multcomp", "multcompView", "mvtnorm", "nlme", "nloptr", "nnet", "numDeriv", "ompr", "ompr.roi", "ordinal", "otel", "pan", "party", "pbkrtest", "pillar", "pkgconfig", "plyr", "prettyunits", "progress", "promises", "proxy", "purrr", "quantreg", "R6", "rappdirs", "rbibutils", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppEigen", "rdist", "Rdpack", "readr", "reformulas", "registry", "Rglpk", "rlang", "rmarkdown", "ROI", "ROI.plugin.glpk", "rpart", "S7", "sandwich", "sass", "scales", "scatterplot3d", "shape", "slam", "SparseM", "StatMatch", "stringi", "stringr", "strucchange", "survey", "survival", "TH.data", "tibble", "tidyr", "tidyselect", "timeDate", "tinytex", "tzdb", "ucminf", "urca", "utf8", "vcd", "vctrs", "viridisLite", "vroom", "withr", "xfun", "yaml", "zoo" ], "_vignettes": [ { "source": "an-application-of-the-OTrecod-package.Rmd", "filename": "an-application-of-the-OTrecod-package.html", "title": "an-application-of-the-OTrecod-package", "engine": "knitr::rmarkdown", "headings": [ "Package installation", "I. The context", "II. Harmonization of the data sources", "III. Selection of the matching variables", "IV. Predicting the missing scales in the databases", "A) Transporting target variables to predict the missing scales", "B) Transporting target and shared variables to predict the missing scales", "V. Validation of the individual predictions", "References" ], "created": "2021-01-29 08:20:14", "modified": "2022-10-05 09:40:02", "commits": 3 }, { "source": "application-on-real-data-with-na.Rmd", "filename": "application-on-real-data-with-na.html", "title": "application-on-real-data-with-na", "engine": "knitr::rmarkdown", "headings": [ "The NCDS project", "The problem", "The solution", "Package installation", "databases installation", "Handling missing information", "Matching predictors evaluation", "Imputation of GO90 using optimal transportation theory", "Conclusion" ], "created": "2022-10-05 09:40:02", "modified": "2022-10-05 09:40:02", "commits": 1 } ], "_score": 3.3010299956639813, "_indexed": true, "_nocasepkg": "otrecod", "_universes": [ "cran" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.2", "date": "2026-05-16T07:35:35.000Z", "distro": "noble", "commit": "81f1653d795e2b6b994f828cf48dcdec829e5ef5", "fileid": "0daaddf351e8cb25894c31e273990d8e73f1145f677883a512b2b3c31b549ca3", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/cran/actions/runs/25956153348" }, { "r": "4.6.0", "os": "linux", "version": "0.1.2", "date": "2026-05-16T07:35:36.000Z", "distro": "noble", "commit": "81f1653d795e2b6b994f828cf48dcdec829e5ef5", "fileid": "1ba10e352d66fd372dd3a440cdd76fb74bfacb10a74aae288d7a48e9d891aaed", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/cran/actions/runs/25956153348" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.2", "date": "2026-06-02T18:27:44.000Z", "commit": "81f1653d795e2b6b994f828cf48dcdec829e5ef5", "fileid": "0eaae803a4b39dca5e4b49634e59b3c69f00c3e77305a47ca5155199346bd888", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/25956153348" } ] }