{
  "_id": "6a49b7a2dbd0482285eb6ed8",
  "Package": "NetGreg",
  "Type": "Package",
  "Title": "Network-Guided Penalized Regression (NetGreg)",
  "Version": "0.0.4",
  "Authors@R": "c(person(\"Seungjun\", \"Ahn\", email = \"seungjun.ahn@mountsinai.org\",\nrole = c(\"cre\", \"aut\"),\ncomment = c(ORCID = \"0000-0002-4816-8924\")),\nperson(\"Eun Jeong\", \"Oh\", email = \"eoh2@northwell.edu\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0001-8949-6564\")))",
  "Description": "A network-guided penalized regression framework that\nintegrates network characteristics from Gaussian graphical\nmodels with partial penalization, accounting for both network\nstructure (hubs and non-hubs) and clinical covariates in\nhigh-dimensional omics data, including transcriptomics and\nproteomics. The full methodological details can be found in our\npublication by Ahn S and Oh EJ (2026)\n<doi:10.1093/bioadv/vbag038>.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-05 01:43:55 UTC",
    "User": "root"
  },
  "Author": "Seungjun Ahn [cre, aut] (ORCID:\n<https://orcid.org/0000-0002-4816-8924>), Eun Jeong Oh [aut]\n(ORCID: <https://orcid.org/0000-0001-8949-6564>)",
  "Maintainer": "Seungjun Ahn <seungjun.ahn@mountsinai.org>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2026-02-27 08:30:29 UTC",
  "RemoteUrl": "https://github.com/cran/NetGreg",
  "RemoteRef": "HEAD",
  "RemoteSha": "000a9b00443d551cbe98646f668f0028584dc274",
  "_user": "cran",
  "_type": "src",
  "_file": "NetGreg_0.0.4.tar.gz",
  "_fileid": "https://r2.ropensci.org/0e3934d74e020bc0d878407e15c900b07e476d1d277a0ed83a3efa8ea8e00220",
  "_filesize": 84599,
  "_sha256": "0e3934d74e020bc0d878407e15c900b07e476d1d277a0ed83a3efa8ea8e00220",
  "_expires": "2026-10-13T01:47:13.000Z",
  "_created": "2026-07-05T01:43:55.000Z",
  "_published": "2026-07-05T01:47:14.654Z",
  "_jobs": [
    {
      "job": 85183449337,
      "time": 160,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8087297326"
    },
    {
      "job": 85183449351,
      "time": 149,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8087296020"
    },
    {
      "job": 85183248891,
      "time": 210,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8087277398"
    },
    {
      "job": 85183449312,
      "time": 159,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8087297152"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/28725935711",
  "_status": "success",
  "_upstream": "https://github.com/cran/NetGreg",
  "_commit": {
    "id": "000a9b00443d551cbe98646f668f0028584dc274",
    "author": "Seungjun Ahn <seungjun.ahn@mountsinai.org>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.0.4\n",
    "time": 1772181029
  },
  "_maintainer": {
    "name": "Seungjun Ahn",
    "email": "seungjun.ahn@mountsinai.org",
    "orcid": "0000-0002-4816-8924"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "huge",
      "role": "Imports"
    },
    {
      "package": "glmnet",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "plsgenomics",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-09",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "0.0.4",
      "date": "2026-02-27"
    }
  ],
  "_stars": 0,
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "followers": 615,
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 229,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/NetGreg"
  },
  "_searchresults": 1,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NetGreg.html",
    "manual.pdf"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.0.2",
      "date": "2025-06-03"
    },
    {
      "version": "0.0.4",
      "date": "2026-02-27"
    }
  ],
  "_exports": [
    "identifyHubs",
    "NetworkGuided"
  ],
  "_help": [
    {
      "page": "identifyHubs",
      "title": "identifyHubs",
      "topics": [
        "identifyHubs"
      ]
    },
    {
      "page": "NetworkGuided",
      "title": "NetworkGuided",
      "topics": [
        "NetworkGuided"
      ]
    }
  ],
  "_rundeps": [
    "boot",
    "cli",
    "codetools",
    "cpp11",
    "dotCall64",
    "dplyr",
    "fields",
    "foreach",
    "generics",
    "glmnet",
    "glue",
    "huge",
    "igraph",
    "iterators",
    "lattice",
    "lifecycle",
    "magrittr",
    "maps",
    "MASS",
    "Matrix",
    "pillar",
    "pkgconfig",
    "plsgenomics",
    "plyr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "reshape2",
    "RhpcBLASctl",
    "rlang",
    "shape",
    "spam",
    "stringi",
    "stringr",
    "survival",
    "tibble",
    "tidyselect",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "netgreg",
  "_universes": [
    "cran"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.4",
      "date": "2026-07-05T01:46:15.000Z",
      "distro": "resolute",
      "commit": "000a9b00443d551cbe98646f668f0028584dc274",
      "fileid": "https://r2.ropensci.org/d5b9211b05f9678b8989c9f43d68686f9e0c76ff4f734fb340ae66c260fd17aa",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/28725935711"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.0.4",
      "date": "2026-07-05T01:46:07.000Z",
      "distro": "resolute",
      "commit": "000a9b00443d551cbe98646f668f0028584dc274",
      "fileid": "https://r2.ropensci.org/b862d66da8f71935d39587634701c8a49a9d867e5377c9e1904308ba92e798e5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/28725935711"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.4",
      "date": "2026-07-05T01:46:54.000Z",
      "commit": "000a9b00443d551cbe98646f668f0028584dc274",
      "fileid": "https://r2.ropensci.org/32785d2f07c035fe3807465edd146323a99df335f52604b2968b0ea8dfc1055d",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/28725935711"
    }
  ]
}