{
  "_id": "6a1fcf73b401979e73433b0f",
  "Package": "JLPM",
  "Type": "Package",
  "Title": "Joint Latent Process Models",
  "Version": "1.0.4",
  "Date": "2026-04-30",
  "Authors@R": "c(person(\"Viviane\", \"Philipps\", role=c(\"aut\", \"cre\"), email=\"Viviane.Philipps@u-bordeaux.fr\"),\nperson(\"Tiphaine\", \"Saulnier\", role=\"aut\"),\nperson(\"Cecile\", \"Proust-Lima\", role=\"aut\"))",
  "Description": "Estimation of extended joint models with shared random\neffects. Longitudinal data are handled in latent process models\nfor continuous (Gaussian or curvilinear) and ordinal outcomes\nwhile proportional hazard models are used for the survival\npart. We propose a frequentist approach using maximum\nlikelihood estimation. See Saulnier et al, 2022\n<doi:10.1016/j.ymeth.2022.03.003>.",
  "License": "GPL (>= 2.0)",
  "URL": "https://VivianePhilipps.github.io/JLPM/",
  "BugReports": "https://github.com/VivianePhilipps/JLPM/issues",
  "LazyLoad": "yes",
  "RoxygenNote": "7.3.3",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-03 06:49:47 UTC",
    "User": "root"
  },
  "Author": "Viviane Philipps [aut, cre], Tiphaine Saulnier [aut], Cecile\nProust-Lima [aut]",
  "Maintainer": "Viviane Philipps <Viviane.Philipps@u-bordeaux.fr>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2026-05-04 15:25:23 UTC",
  "RemoteUrl": "https://github.com/cran/JLPM",
  "RemoteRef": "HEAD",
  "RemoteSha": "b8d0001b173805ad93ad19aea72b6663638c5e24",
  "MD5sum": "ff1ba43cc93340ffa22038d91bf0ebfa",
  "_user": "cran",
  "_type": "src",
  "_file": "JLPM_1.0.4.tar.gz",
  "_fileid": "50113b46da45a816fa0cae2c9938130a7d4a2484b977dda2bba90f21dfe2f2af",
  "_filesize": 264130,
  "_sha256": "50113b46da45a816fa0cae2c9938130a7d4a2484b977dda2bba90f21dfe2f2af",
  "_created": "2026-06-03T06:49:47.000Z",
  "_published": "2026-06-03T06:53:39.807Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79237988490,
      "time": 177,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7377669826"
    },
    {
      "job": 79237988503,
      "time": 131,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7377656528"
    },
    {
      "job": 79237988582,
      "time": 142,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7377660357"
    },
    {
      "job": 79237988517,
      "time": 134,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7377657255"
    },
    {
      "job": 79237575837,
      "time": 176,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7377618274"
    },
    {
      "job": 79237988455,
      "time": 128,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7377655369"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/26868458878",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/JLPM",
  "_commit": {
    "id": "b8d0001b173805ad93ad19aea72b6663638c5e24",
    "author": "Viviane Philipps <Viviane.Philipps@u-bordeaux.fr>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.0.4\n",
    "time": 1777908323
  },
  "_maintainer": {
    "name": "Viviane Philipps",
    "email": "viviane.philipps@u-bordeaux.fr",
    "login": "vivianephilipps",
    "description": "",
    "uuid": 25640203
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "lcmm",
      "role": "Depends"
    },
    {
      "package": "survival",
      "version": ">= 2.37-2",
      "role": "Imports"
    },
    {
      "package": "spacefillr",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "marqLevAlg",
      "version": ">= 2.0.6",
      "role": "Imports"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-18",
      "n": 1
    },
    {
      "week": "2026-19",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "1.0.3",
      "date": "2026-04-27"
    },
    {
      "name": "1.0.4",
      "date": "2026-05-04"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "vivianephilipps",
      "count": 4,
      "uuid": 25640203
    }
  ],
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 348,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/JLPM"
  },
  "_devurl": "https://github.com/vivianephilipps/jlpm",
  "_pkgdown": "https://VivianePhilipps.github.io/JLPM/",
  "_searchresults": 1,
  "_topics": [
    "fortran"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/JLPM.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/vivianephilipps/jlpm",
  "_realowner": "vivianephilipps",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.1",
      "date": "2022-03-31"
    },
    {
      "version": "1.0.2",
      "date": "2023-10-06"
    },
    {
      "version": "1.0.3",
      "date": "2026-04-27"
    },
    {
      "version": "1.0.4",
      "date": "2026-05-04"
    }
  ],
  "_exports": [
    "convert",
    "createFargs",
    "createX0",
    "diffSojournTime",
    "IRT4Sselecting",
    "IRT4Sstaging",
    "jointLPM",
    "loglik",
    "predictRE",
    "REconddensity",
    "removeNA",
    "sojournTime",
    "WaldMult"
  ],
  "_help": [
    {
      "page": "JLPM-package",
      "title": "Estimation of joint latent process models",
      "topics": [
        "JLPM-package"
      ]
    },
    {
      "page": "convert",
      "title": "Conversion",
      "topics": [
        "convert"
      ]
    },
    {
      "page": "createFargs",
      "title": "Likelihood arguments",
      "topics": [
        "createFargs"
      ]
    },
    {
      "page": "createX0",
      "title": "createX0",
      "topics": [
        "createX0"
      ]
    },
    {
      "page": "diffSojournTime",
      "title": "Difference of sojourn times",
      "topics": [
        "diffSojournTime"
      ]
    },
    {
      "page": "ForInternalUse",
      "title": "For internal use only ...",
      "topics": [
        ".expect",
        ".integrate_info",
        ".Pim",
        ".Pim_prime",
        "ForInternalUse"
      ]
    },
    {
      "page": "IRT4Sselecting",
      "title": "Fisher information function, used in Step 4 _ Selecting from the 4Smethod",
      "topics": [
        "IRT4Sselecting"
      ]
    },
    {
      "page": "IRT4Sstaging",
      "title": "Projection function, used in Step 3 _ Staging from the 4Smethod",
      "topics": [
        "IRT4Sstaging"
      ]
    },
    {
      "page": "jointLPM",
      "title": "Estimation of latent process joint models for multivariate longitudinal outcomes and time-to-event data.",
      "topics": [
        "jointLPM"
      ]
    },
    {
      "page": "loglik",
      "title": "Wrapper to the Fortran subroutine that computes the log-likelihood",
      "topics": [
        "loglik"
      ]
    },
    {
      "page": "predictRE",
      "title": "Random effects prediction",
      "topics": [
        "predictRE"
      ]
    },
    {
      "page": "print.jointLPM",
      "title": "Brief summary of a joint latent process model",
      "topics": [
        "print.jointLPM"
      ]
    },
    {
      "page": "REconddensity",
      "title": "REconddendity",
      "topics": [
        "REconddensity"
      ]
    },
    {
      "page": "removeNA",
      "title": "removeNA",
      "topics": [
        "removeNA"
      ]
    },
    {
      "page": "sojournTime",
      "title": "Computation of sojourn time under specific condition",
      "topics": [
        "sojournTime"
      ]
    },
    {
      "page": "StandardMethods",
      "title": "Standard methods for estimated models",
      "topics": [
        "coef.jointLPM",
        "StandardMethods",
        "vcov.jointLPM"
      ]
    },
    {
      "page": "summary.jointLPM",
      "title": "Summary of a joint latent process model",
      "topics": [
        "summary.jointLPM"
      ]
    },
    {
      "page": "WaldMult",
      "title": "WaldMult Performs multivariate Wald tests.",
      "topics": [
        "WaldMult"
      ]
    }
  ],
  "_readme": "https://github.com/cran/JLPM/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "codetools",
    "doParallel",
    "foreach",
    "glue",
    "iterators",
    "lattice",
    "lcmm",
    "lifecycle",
    "magrittr",
    "marqLevAlg",
    "Matrix",
    "mvtnorm",
    "nlme",
    "numDeriv",
    "Rcpp",
    "rlang",
    "spacefillr",
    "stringi",
    "stringr",
    "survival",
    "vctrs"
  ],
  "_sysdeps": [
    {
      "shlib": "libgfortran",
      "package": "libgfortran5",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "fortran",
      "homepage": "http://gcc.gnu.org/",
      "description": "Runtime library for GNU Fortran applications"
    }
  ],
  "_score": 2,
  "_indexed": false,
  "_nocasepkg": "jlpm",
  "_universes": [
    "cran"
  ],
  "_indexurl": "https://vivianephilipps.r-universe.dev/JLPM",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-06-03T06:52:42.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "b8d0001b173805ad93ad19aea72b6663638c5e24",
      "fileid": "fa84c78c1b838ca8749932a6f71dffc9f5530c4b1612af39bc910d9f47bfb475",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26868458878"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-06-03T06:51:51.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "b8d0001b173805ad93ad19aea72b6663638c5e24",
      "fileid": "cb5f23be7179a96fce7af67cf1033ee089c69a2ce2d08d12268e9813ec206f6a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26868458878"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-06-03T06:52:09.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "b8d0001b173805ad93ad19aea72b6663638c5e24",
      "fileid": "ee165b2741c398e69e5a58373e341281b30b4b7f728dbcb8591902d86b28d911",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26868458878"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.4",
      "date": "2026-06-03T06:51:54.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "b8d0001b173805ad93ad19aea72b6663638c5e24",
      "fileid": "624a1f29e824f1eefe6a19230000e1381db8d4e58d5652d983169800a236d97d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26868458878"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.4",
      "date": "2026-06-03T06:52:17.000Z",
      "arch": "emscripten",
      "commit": "b8d0001b173805ad93ad19aea72b6663638c5e24",
      "fileid": "213f5ccbebb7bf17eb32d2344dfea5883e2de18177c3d2e5053957f1e0f9d58d",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/26868458878"
    }
  ]
}