{ "_id": "6ae24c958d250e7ad09eec36", "Package": "INLAcircular", "Type": "Package", "Title": "Bayesian Joint Circular Regression Using 'INLA'", "Version": "1.0.0", "Authors@R": "c(person(\ngiven = \"Xiang\",\nfamily = \"Ye\",\nemail = \"xiang.ye@kaust.edu.sa\",\nrole = c(\"aut\", \"cre\", \"cph\")\n),\nperson(\ngiven = \"Janet\",\nfamily = \"Van Niekerk\",\nrole = \"aut\"\n),\nperson(\ngiven = \"Haavard\",\nfamily = \"Rue\",\nrole = c(\"aut\", \"cph\")\n),\nperson(\ngiven = \"Gerard\",\nfamily = \"Jungman\",\nrole = c(\"ctb\", \"cph\"),\ncomment = \"Bessel routines adapted from the GNU Scientific Library\"\n),\nperson(\ngiven = \"Peter John\",\nfamily = \"Acklam\",\nrole = \"ctb\",\ncomment = \"Normal quantile approximation\"\n))", "Description": "Provides a Bayesian regression framework for joint models\nwith circular responses and covariates using integrated nested\nLaplace approximations, following Ye, Van Niekerk and Rue\n(2026) . The package supports\nlink-adjusted von Mises likelihoods, shared latent predictors,\nstructured latent effects, and optional LKJ-based multivariate\ncovariance models. It also provides compiled circular densities\nand d/p/q/r penalized-complexity priors for von Mises,\ncardioid, and wrapped Cauchy concentration parameters as\ndeveloped by Ye, Van Niekerk and Rue (2026)\n.", "License": "GPL (>= 3)", "URL": "https://github.com/XiangYEstats/INLAcircular", "BugReports": "https://github.com/XiangYEstats/INLAcircular/issues", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr, rmarkdown", "Additional_repositories": "https://inla.r-inla-download.org/R/stable", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-10-28 19:20:37 UTC", "User": "root" }, "Author": "Xiang Ye [aut, cre, cph], Janet Van Niekerk [aut], Haavard Rue\n[aut, cph], Gerard Jungman [ctb, cph] (Bessel routines adapted\nfrom the GNU Scientific Library), Peter John Acklam [ctb]\n(Normal quantile approximation)", "Maintainer": "Xiang Ye ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-10-28 10:40:08 UTC", "RemoteUrl": "https://github.com/cran/INLAcircular", "RemoteRef": "HEAD", "RemoteSha": "c43d891eb1a10ab689407f6b3ec54e196d498375", "_user": "cran", "_type": "src", "_file": "INLAcircular_1.0.0.tar.gz", "_fileid": "https://r2.ropensci.org/59f2375225492900438b2b8fa0aa8e53978f7f627370cff4e8ccd7d8ccb34cce", "_filesize": 554901, "_sha256": "59f2375225492900438b2b8fa0aa8e53978f7f627370cff4e8ccd7d8ccb34cce", "_expires": "2027-02-05T19:27:13.000Z", "_created": "2026-10-28T19:20:37.000Z", "_published": "2026-10-28T19:27:16.997Z", "_upstream": "https://github.com/cran/INLAcircular", "_status": "success", "_maintainer": { "name": "Xiang Ye", "email": "xiang.ye@kaust.edu.sa" }, "_jobs": [ { "job": 123046172642, "time": 119, "config": "linux-devel-arm64", "r": "4.7.0", "check": "ERROR", "artifact": "12843778730" }, { "job": 123046172716, "time": 344, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12844284233" }, { "job": 123046172700, "time": 107, "config": "linux-release-arm64", "r": "4.6.1", "check": "ERROR", "artifact": "12844312740" }, { "job": 123046172650, "time": 134, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12844463229" }, { "job": 123042616559, "time": 397, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12845490695" }, { "job": 123046172558, "time": 120, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12845092778" }, { "job": 123046172768, "time": 254, "config": "windows-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "12845466554" }, { "job": 123046172698, "time": 166, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12843809963" }, { "job": 123046172631, "time": 236, "config": "windows-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12845545895" }, { "job": 123046172624, "time": 133, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12843863746" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085", "_commit": { "id": "c43d891eb1a10ab689407f6b3ec54e196d498375", "author": "Xiang Ye ", "committer": "cran-robot ", "message": "version 1.0.0\n", "time": 1793184008 }, "_distro": "resolute", "_host": "GitHub-Actions", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "dplyr", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "circular", "role": "Suggests" }, { "package": "graphpcor", "role": "Suggests" }, { "package": "INLA", "version": ">= 25.08.21", "role": "Suggests" }, { "package": "INLAtools", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "pkgload", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2026-44", "n": 1 } ], "_tags": [ { "name": "1.0.0", "date": "2026-10-28" } ], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 634, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/INLAcircular" }, "_devurl": "https://github.com/xiangyestats/inlacircular", "_searchresults": 18, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/INLAcircular.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_cranurl": false, "_releases": [ { "version": "1.0.0", "date": "2026-10-28" } ], "_exports": [ "bessel_i", "covariate", "dcard", "dcardioid", "dlavm", "dpc.card", "dpc.card0", "dpc.vm0", "dpc.vminf", "dpc.wc", "dvm", "dwc", "dwrappedcauchy", "index", "inla", "inlacc", "intercept", "lavm.cloglike", "lavm.link", "likelihood", "LKJcc", "plavm", "ppc.card", "ppc.card0", "ppc.vm0", "ppc.vminf", "ppc.wc", "pvm", "qlavm", "qpc.card", "qpc.card0", "qpc.vm0", "qpc.vminf", "qpc.wc", "qvm", "rlavm", "rpc.card", "rpc.card0", "rpc.vm0", "rpc.vminf", "rpc.wc", "rvm" ], "_datasets": [ { "name": "wind_newyork", "title": "New York hourly wind climate normals", "object": "wind_newyork", "class": [ "data.frame" ], "fields": [ "DATE", "HLY.WIND.VCTDIR", "HLY.WIND.VCTSPD", "HLY.TEMP.NORMAL", "datetime", "month", "day", "hour" ], "rows": 8759, "table": true, "tojson": true } ], "_help": [ { "page": "bessel_i", "title": "Modified Bessel Function of the First Kind", "topics": [ "bessel_i" ] }, { "page": "circular_densities", "title": "Cardioid and Wrapped Cauchy Densities", "topics": [ "circular_densities", "dcard", "dcardioid", "dwc", "dwrappedcauchy" ] }, { "page": "covariate", "title": "Define a covariate or copied predictor in an 'inlacc()' formula", "topics": [ "covariate" ] }, { "page": "index", "title": "Map observations to a latent process in 'inlacc()'", "topics": [ "index" ] }, { "page": "inla", "title": "Run INLA with the INLAcircular LAvM likelihood", "topics": [ "inla" ] }, { "page": "inlacc", "title": "Fit single or joint circular models with INLA", "topics": [ "inlacc" ] }, { "page": "intercept", "title": "Define a custom intercept in an 'inlacc()' formula", "topics": [ "intercept" ] }, { "page": "lavm", "title": "The Link-Adjusted von Mises (LAvM) Distribution", "topics": [ "dlavm", "lavm", "plavm", "qlavm", "rlavm" ] }, { "page": "lavm.cloglike", "title": "Define the compiled LAvM cloglike for direct R-INLA fitting", "topics": [ "lavm.cloglike" ] }, { "page": "lavm.link", "title": "Create Link-Adjusted von Mises (LAvM) Link Object", "topics": [ "lavm.link" ] }, { "page": "likelihood", "title": "Define one likelihood block for 'inlacc()'", "topics": [ "likelihood" ] }, { "page": "LKJcc", "title": "Prepare graphpcor LKJ covariance components for 'inlacc()'", "topics": [ "LKJcc" ] }, { "page": "pc_card", "title": "PC Prior for Cardioid Concentration: Cardioid Base", "topics": [ "dpc.card", "pc.card", "pc_card", "ppc.card", "qpc.card", "rpc.card" ] }, { "page": "pc_card0", "title": "PC Prior for Cardioid Concentration: Uniform Base", "topics": [ "dpc.card0", "pc.card0", "pc_card0", "ppc.card0", "qpc.card0", "rpc.card0" ] }, { "page": "pc_vm0", "title": "PC Prior for von Mises Concentration: Uniform Base", "topics": [ "dpc.vm0", "pc.vm0", "pc_vm0", "ppc.vm0", "qpc.vm0", "rpc.vm0" ] }, { "page": "pc_vminf", "title": "PC Prior for von Mises Concentration: Point-Mass Base", "topics": [ "dpc.vminf", "pc.vminf", "pc_vminf", "ppc.vminf", "qpc.vminf", "rpc.vminf" ] }, { "page": "pc_wc", "title": "PC Prior for Wrapped Cauchy Concentration", "topics": [ "dpc.wc", "pc.wc", "pc_wc", "ppc.wc", "qpc.wc", "rpc.wc" ] }, { "page": "print.inlacc_summary", "title": "Print an 'inlacc' summary", "topics": [ "print.inlacc_summary" ] }, { "page": "print.inlacc_time", "title": "Print elapsed times from an 'inlacc()' fit", "topics": [ "print.inlacc_time" ] }, { "page": "summary.inlacc", "title": "Summarize an 'inlacc()' fit", "topics": [ "summary.inlacc" ] }, { "page": "von_mises", "title": "The von Mises Distribution", "topics": [ "dvm", "pvm", "qvm", "rvm", "von_mises" ] }, { "page": "wind_newyork", "title": "New York hourly wind climate normals", "topics": [ "wind_newyork" ] } ], "_readme": "https://github.com/cran/INLAcircular/raw/HEAD/README.md", "_rundeps": [ "cli", "dplyr", "generics", "glue", "lifecycle", "magrittr", "pillar", "pkgconfig", "R6", "rlang", "tibble", "tidyselect", "utf8", "vctrs", "withr" ], "_vignettes": [ { "source": "INLAcircular-guide.Rmd", "filename": "INLAcircular-guide.html", "title": "INLAcircular: User Guide and Function Reference", "author": "Xiang Ye", "engine": "knitr::rmarkdown", "headings": [ "Scope and conventions", "Installation", "Circular distributions", "Quick comparison", "Von Mises", "Link-adjusted von Mises", "Cardioid and wrapped Cauchy densities", "Penalized-complexity priors", "Von Mises prior with uniform base: pc.vm0", "Von Mises prior with point-mass base: pc.vminf", "Cardioid prior with uniform base: pc.card0", "Cardioid prior with base kappa = 1/2: pc.card", "Wrapped Cauchy prior: pc.wc", "Density, probability, and vectorization rules", "Direct fitting with R-INLA", "LAvM likelihood controls", "Convenience call for a single LAvM model", "Building model specifications", "Formula terms and their interpretation", "intercept()", "covariate()", "f() and standard INLA options", "Mapping observations with index()", "Fitting with inlacc()", "Arguments and defaults", "Single-likelihood fit", "Joint likelihoods and copied predictors", "Returned object", "Modelling multivariate effects with graphpcor", "Declaring an LKJ-correlated effect", "Replicate indices", "Recovering covariance information", "Results and summaries", "Utilities and included data", "Modified Bessel function", "New York wind data", "Complete public API index", "Numerical implementation notes", "Reproducibility" ], "created": "2026-10-28 10:40:08", "modified": "2026-10-28 10:40:08", "commits": 1 } ], "_score": 2.9542425094393248, "_indexed": true, "_nocasepkg": "inlacircular", "_universes": [ "cran", "xiangyestats" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.0", "date": "2026-10-28T19:22:44.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/e7f4b93a4a70289657b137f3327a269be4c4efa1e06b4269d97837837d52de50", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.7.0", "os": "linux", "version": "1.0.0", "date": "2026-10-28T19:26:14.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/cbbd5ddc62dd50e01189b6d5721a90620a3b8531a8172a9e01510221a44e8a3a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.6.1", "os": "linux", "version": "1.0.0", "date": "2026-10-28T19:22:38.000Z", "distro": "resolute", "arch": "aarch64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/baafbe31ea030f6127a91ca71085f6936112bbc49635fb7c174cc01569011a00", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.6.1", "os": "linux", "version": "1.0.0", "date": "2026-10-28T19:22:52.000Z", "distro": "resolute", "arch": "x86_64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/86ad69b007e5138c7c8a25250e852f3a8f8db1f22cc4dc3d23cbbe5c064e0de4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.0", "date": "2026-10-28T19:23:01.000Z", "arch": "emscripten", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/d59718e259c3074aec4af3574b3d8200f9d35bb46324a7dadfcc09dd39c137cd", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.7.0", "os": "win", "version": "1.0.0", "date": "2026-10-28T19:24:44.000Z", "arch": "aarch64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/b8c0010bf97071606a96d968882de9ad768402f984861591c0b412740b8edf68", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.7.0", "os": "win", "version": "1.0.0", "date": "2026-10-28T19:22:19.000Z", "arch": "x86_64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/ac09478ed475c9bba25d02a5297232f95a7bca1ade3b3bfd3e7d268542c79751", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.6.1", "os": "win", "version": "1.0.0", "date": "2026-10-28T19:24:28.000Z", "arch": "aarch64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/c169dafd4bf3330d245befebfdc85479d2468339d28b2064d04ab11a7ab6b181", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" }, { "r": "4.6.1", "os": "win", "version": "1.0.0", "date": "2026-10-28T19:22:26.000Z", "arch": "x86_64", "commit": "c43d891eb1a10ab689407f6b3ec54e196d498375", "fileid": "https://r2.ropensci.org/281f185cfeb821fd07538db40d99a7b0bb3bb052af217b1be01734525dd39170", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/40752428085" } ] }