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  "Description": "Facilitates the extraction and organization of\nstrand-specific genomic features from GFF3 files. In many\nspecies and variants, high quality genome annotations are not\nalways available, necessitating de novo annotation using tools\nsuch as AUGUSTUS (Stanke et al., 2006;\n<doi:10.1093/nar/gkl200>). However, downstream processing of\nsuch annotations to obtain structured information, such as\nstrand-wise gene locations, transcript regions, and associated\nprotein identifiers—can be computationally intensive and\ncomplex. 'GFFStrandLoc' provides a streamlined framework to\nparse GFF3 files and generate structured outputs containing\nstrand-wise and region-wise genomic coordinates for each\ntranscript, along with their associated protein information.\nAdditionally, it enables users to define custom promoter\nlengths and extract corresponding promoter region coordinates\nfor genes in a strand-aware manner. By simplifying\npost-annotation processing, it enhances the usability of de\nnovo annotated genomic datasets for downstream analysis and\ninterpretation.",
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