{
  "_id": "6aec68261e2c7b3a4f536003",
  "Package": "F2Adonis2",
  "Title": "PERMANOVA using the F2 Statistic",
  "Version": "0.1.1",
  "Authors@R": "c(\nperson(\"Lakviru\", \"Perera\", email = \"korathotagelaperera@montana.edu\",\nrole = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0009-0003-7717-3532\")),\nperson(\"Mark\", \"Greenwood\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-6933-1201\"))\n)",
  "Language": "en-US",
  "Description": "Implements the F2 statistic of Anderson et al. (2017)\n<doi:10.1111/anzs.12176> for permutational multivariate\nanalysis of variance (PERMANOVA) on dissimilarity matrices. The\nF2 statistic uses group-specific dispersion estimates, so group\ncentroids can be compared when dispersions differ and group\nsizes are unequal. P-values are obtained by permutation,\nbootstrap, or bias-adjusted bootstrap. The formula interface\nfollows 'adonis2()' in the 'vegan' package.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.3",
  "LazyData": "true",
  "VignetteBuilder": "knitr",
  "URL": "https://github.com/LakviruPerera/F2Adonis2",
  "BugReports": "https://github.com/LakviruPerera/F2Adonis2/issues",
  "Config/testthat/edition": "3",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-11-05 11:24:20 UTC",
    "User": "root"
  },
  "Author": "Lakviru Perera [aut, cre, cph] (ORCID:\n<https://orcid.org/0009-0003-7717-3532>), Mark Greenwood [aut]\n(ORCID: <https://orcid.org/0000-0001-6933-1201>)",
  "Maintainer": "Lakviru Perera <korathotagelaperera@montana.edu>",
  "Repository": "https://cran.r-universe.dev",
  "Date/Publication": "2026-11-04 22:20:02 UTC",
  "RemoteUrl": "https://github.com/cran/F2Adonis2",
  "RemoteRef": "HEAD",
  "RemoteSha": "259a43a2cb969ce9211efc67b606ed40ce898813",
  "_user": "cran",
  "_type": "src",
  "_file": "F2Adonis2_0.1.1.tar.gz",
  "_fileid": "https://r2.ropensci.org/9be3392fad0e92a89c7a581929ee2f95233e01f059955a37697687a547e0a05b",
  "_filesize": 1945710,
  "_sha256": "9be3392fad0e92a89c7a581929ee2f95233e01f059955a37697687a547e0a05b",
  "_expires": "2027-02-13T11:27:32.000Z",
  "_created": "2026-11-05T11:24:20.000Z",
  "_published": "2026-11-05T11:27:34.824Z",
  "_upstream": "https://github.com/cran/F2Adonis2",
  "_status": "success",
  "_maintainer": {
    "name": "Lakviru Perera",
    "email": "korathotagelaperera@montana.edu",
    "orcid": "0009-0003-7717-3532"
  },
  "_jobs": [
    {
      "job": 127215826261,
      "time": 150,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13410836747"
    },
    {
      "job": 127215826219,
      "time": 130,
      "config": "linux-release-x86_64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13410168282"
    },
    {
      "job": 127213921419,
      "time": 249,
      "config": "source",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13410108310"
    },
    {
      "job": 127215826038,
      "time": 114,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "13410083633"
    },
    {
      "job": 127215826082,
      "time": 98,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "13409739542"
    },
    {
      "job": 127215826074,
      "time": 99,
      "config": "windows-release-x86_64",
      "r": "4.6.2",
      "check": "OK",
      "artifact": "13410347771"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cran/actions/runs/42018139930",
  "_commit": {
    "id": "259a43a2cb969ce9211efc67b606ed40ce898813",
    "author": "Lakviru Perera <korathotagelaperera@montana.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.1\n",
    "time": 1793830802
  },
  "_distro": "resolute",
  "_host": "GitHub-Actions",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "vegan",
      "version": ">= 2.7-3",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "dplyr",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "role": "Suggests"
    },
    {
      "package": "onewaytests",
      "role": "Suggests"
    },
    {
      "package": "yarrr",
      "role": "Suggests"
    },
    {
      "package": "combinat",
      "role": "Suggests"
    },
    {
      "package": "kableExtra",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-45",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "0.1.1",
      "date": "2026-11-04"
    }
  ],
  "_stars": 0,
  "_userbio": {
    "uuid": 6899542,
    "type": "organization",
    "name": "cran",
    "followers": 635,
    "description": "Unofficial read-only mirror of all CRAN R packages"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/F2Adonis2"
  },
  "_devurl": "https://github.com/lakviruperera/f2adonis2",
  "_searchresults": 0,
  "_rbuild": "4.6.2",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/F2Adonis2.html",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2026-11-05"
    }
  ],
  "_exports": [
    "F2_adonis2"
  ],
  "_datasets": [
    {
      "name": "norway_metadata",
      "title": "Norway Benthic Macrofauna Metadata",
      "object": "norway_metadata",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Area"
      ],
      "rows": 101,
      "table": true,
      "tojson": true
    },
    {
      "name": "norway_pa",
      "title": "Norway Benthic Macrofauna Presence-Absence Data",
      "object": "norway_pa",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [],
      "rows": 101,
      "table": true,
      "tojson": true
    },
    {
      "name": "pkd_metabolites",
      "title": "Polycystic Kidney Disease (PKD) Metabolites",
      "object": "pkd_metabolites",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [],
      "rows": 95,
      "table": true,
      "tojson": true
    },
    {
      "name": "pkd_metadata",
      "title": "Polycystic Kidney Disease (PKD) Metadata",
      "object": "pkd_metadata",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Group"
      ],
      "rows": 95,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "F2_adonis2",
      "title": "Permutational Multivariate Analysis of Variance Using the F2 Statistic",
      "topics": [
        "F2_adonis2"
      ]
    },
    {
      "page": "norway_metadata",
      "title": "Norway Benthic Macrofauna Metadata",
      "topics": [
        "norway_metadata"
      ]
    },
    {
      "page": "norway_pa",
      "title": "Norway Benthic Macrofauna Presence-Absence Data",
      "topics": [
        "norway_pa"
      ]
    },
    {
      "page": "pkd_metabolites",
      "title": "Polycystic Kidney Disease (PKD) Metabolites",
      "topics": [
        "pkd_metabolites"
      ]
    },
    {
      "page": "pkd_metadata",
      "title": "Polycystic Kidney Disease (PKD) Metadata",
      "topics": [
        "pkd_metadata"
      ]
    }
  ],
  "_readme": "https://github.com/cran/F2Adonis2/raw/HEAD/README.md",
  "_rundeps": [
    "cluster",
    "lattice",
    "MASS",
    "Matrix",
    "mgcv",
    "nlme",
    "permute",
    "vegan"
  ],
  "_vignettes": [
    {
      "source": "Introduction_to_F2Adonis2.Rmd",
      "filename": "Introduction_to_F2Adonis2.html",
      "title": "Introduction_to_F2Adonis2",
      "author": "Lakviru Perera",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Summary",
        "Statement of Need",
        "Methodology: The $F_2$ Statistic",
        "Resampling Methods",
        "Univariate Comparison",
        "Case Study 1: Norway Benthic Macrofauna",
        "Load Data and Libraries",
        "Visualizing Dispersion Heterogeneity",
        "Global F2 PERMANOVA",
        "Case Study 2: PKD Metabolomics",
        "Implementation Details",
        "References"
      ],
      "created": "2026-11-04 22:20:02",
      "modified": "2026-11-04 22:20:02",
      "commits": 1
    },
    {
      "source": "PKD_Subsample_Study.Rmd",
      "filename": "PKD_Subsample_Study.html",
      "title": "PKD_Subsample_Study",
      "author": "Lakviru Perera",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Reproducing the paper's exact settings"
      ],
      "created": "2026-11-04 22:20:02",
      "modified": "2026-11-04 22:20:02",
      "commits": 1
    }
  ],
  "_score": 3,
  "_indexed": false,
  "_nocasepkg": "f2adonis2",
  "_universes": [
    "cran",
    "lakviruperera"
  ],
  "_indexurl": "https://lakviruperera.r-universe.dev/F2Adonis2",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-11-05T11:26:46.000Z",
      "distro": "resolute",
      "commit": "259a43a2cb969ce9211efc67b606ed40ce898813",
      "fileid": "https://r2.ropensci.org/d36efe5008a650690bcc8e7e45411f4c7998a18094226d29c441a5f5f54396e0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/42018139930"
    },
    {
      "r": "4.6.2",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-11-05T11:26:31.000Z",
      "distro": "resolute",
      "commit": "259a43a2cb969ce9211efc67b606ed40ce898813",
      "fileid": "https://r2.ropensci.org/2eb73c340c950f697321da32aeb20eba1306426046a217928c2e4eeace6797b4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/42018139930"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-11-05T11:26:39.000Z",
      "commit": "259a43a2cb969ce9211efc67b606ed40ce898813",
      "fileid": "https://r2.ropensci.org/a30bbbac00c05315453bedcfa311bd37389f685aafebbad8363a3242e330ac5e",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/42018139930"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-11-05T11:25:44.000Z",
      "commit": "259a43a2cb969ce9211efc67b606ed40ce898813",
      "fileid": "https://r2.ropensci.org/6b74cb80dc4c058b5df7bca58576943c6bc6b39df810be09819f8ad3100f0660",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/42018139930"
    },
    {
      "r": "4.6.2",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-11-05T11:25:49.000Z",
      "commit": "259a43a2cb969ce9211efc67b606ed40ce898813",
      "fileid": "https://r2.ropensci.org/b42830341bf25f438e02cf33a990fc51c1af026e74d0dd12de037241f357afab",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cran/actions/runs/42018139930"
    }
  ]
}