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  "Title": "Co-Expression Differential Network Analysis",
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  "Description": "Categorize links and nodes from multiple networks in 3\ncategories: Common links (alpha) specific links (gamma), and\ndifferent links (beta). Also categorizes the links into\nsub-categories and groups. The package includes a visualization\ntool for the networks. More information about the methodology\ncan be found at: Gysi et. al., 2018 <arXiv:1802.00828>.",
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