{ "_id": "6a27e1aa24555f66ed54857d", "Package": "Bayenet", "Type": "Package", "Title": "Robust Bayesian Elastic Net", "Version": "0.3", "Date": "2025-03-19", "Authors@R": "c( person(\"Xi\", \"Lu\", role = c(\"aut\", \"cre\"),\nemail = \"xilu@ksu.edu\"),\nperson(\"Cen\", \"Wu\", role = \"aut\"))", "Description": "As heavy-tailed error distribution and outliers in the\nresponse variable widely exist, models which are robust to data\ncontamination are highly demanded. Here, we develop a novel\nrobust Bayesian variable selection method with elastic net\npenalty. In particular, the spike-and-slab priors have been\nincorporated to impose sparsity. An efficient Gibbs sampler has\nbeen developed to facilitate computation.The core modules of\nthe package have been developed in 'C++' and R.", "License": "GPL-2", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.1", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-09 09:45:47 UTC", "User": "root" }, "Author": "Xi Lu [aut, cre], Cen Wu [aut]", "Maintainer": "Xi Lu ", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2025-03-19 21:31:39 UTC", "RemoteUrl": "https://github.com/cran/Bayenet", "RemoteRef": "HEAD", "RemoteSha": "a76e7fe956bfeb344e91ec78c7b2ddf175bc38ad", "MD5sum": "2ac8d9f51f0dcb79374b8bec42a6875c", "_user": "cran", "_type": "src", "_file": "Bayenet_0.3.tar.gz", "_fileid": "3799ff23d15d78aa9672de45750a8e7be8da2376fba8260318054e8e426371ba", "_filesize": 192308, "_sha256": "3799ff23d15d78aa9672de45750a8e7be8da2376fba8260318054e8e426371ba", "_created": "2026-06-09T09:45:47.000Z", "_published": "2026-06-09T09:49:30.119Z", "_distro": "noble", "_jobs": [ { "job": 80294063369, "time": 136, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7504191162" }, { "job": 80294063500, "time": 139, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7504190792" }, { "job": 80294063360, "time": 158, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7504198925" }, { "job": 80294063341, "time": 122, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7504184630" }, { "job": 80293441830, "time": 204, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7504136858" }, { "job": 80294063411, "time": 126, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7504187195" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/27197663193", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/Bayenet", "_commit": { "id": "a76e7fe956bfeb344e91ec78c7b2ddf175bc38ad", "author": "Xi Lu ", "committer": "cran-robot ", "message": "version 0.3\n", "time": 1742419899 }, "_maintainer": { "name": "Xi Lu", "email": "xilu@ksu.edu" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "Rcpp", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "MCMCpack", "role": "Imports" }, { "package": "base", "role": "Imports" }, { "package": "gsl", "role": "Imports" }, { "package": "VGAM", "role": "Imports" }, { "package": "MASS", "role": "Imports" }, { "package": "hbmem", "role": "Imports" }, { "package": "SuppDists", "role": "Imports" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 224, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/Bayenet" }, "_searchresults": 2, "_topics": [ "openblas", "cpp", "openmp" ], "_rbuild": "4.6.0", "_assets": [ "extra/Bayenet.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "manual.pdf" ], "_homeurl": "https://github.com/xilustat/bayenet", "_realowner": "xilustat", "_cranurl": false, "_releases": [ { "version": "0.1", "date": "2023-05-24" }, { "version": "0.2", "date": "2024-04-05" }, { "version": "0.3", "date": "2025-03-22" } ], "_exports": [ "Bayenet", "Selection" ], "_datasets": [ { "name": "clin", "title": "simulated data for demonstrating the features of Bayenet.", "object": "dat", "class": [ "matrix", "array" ], "fields": {}, "rows": 10, "table": true, "tojson": true }, { "name": "coef", "title": "simulated data for demonstrating the features of Bayenet.", "object": "dat", "class": [ "numeric" ], "fields": [], "table": false, "tojson": true }, { "name": "X", "title": "simulated data for demonstrating the features of Bayenet.", "object": "dat", "class": [ "matrix", "array" ], "fields": {}, "rows": 10, "table": true, "tojson": true }, { "name": "Y", "title": "simulated data for demonstrating the features of Bayenet.", "object": "dat", "class": [ "matrix", "array" ], "fields": {}, "rows": 10, "table": true, "tojson": true } ], "_help": [ { "page": "Bayenet-package", "title": "Robust Bayesian Elastic Net", "topics": [ "Bayenet-package" ] }, { "page": "Bayenet", "title": "fit a robust Bayesian elastic net variable selection model for genetic study.", "topics": [ "Bayenet" ] }, { "page": "dat", "title": "simulated data for demonstrating the features of Bayenet.", "topics": [ "clin", "coef", "dat", "X", "Y" ] }, { "page": "predict.Bayenet", "title": "make predictions from a Bayenet object", "topics": [ "predict.Bayenet" ] }, { "page": "print.Bayenet", "title": "print a Bayenet object", "topics": [ "print.Bayenet" ] }, { "page": "print.Bayenet.pred", "title": "print a predict.Bayenet object", "topics": [ "print.Bayenet.pred" ] }, { "page": "print.Selection", "title": "print a Selection object", "topics": [ "print.Selection" ] }, { "page": "Selection", "title": "Variable selection for a Bayenet object", "topics": [ "Selection" ] } ], "_rundeps": [ "coda", "gsl", "hbmem", "lattice", "MASS", "Matrix", "MatrixModels", "mcmc", "MCMCpack", "quantreg", "Rcpp", "RcppArmadillo", "SparseM", "SuppDists", "survival", "VGAM" ], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.26+ds-1ubuntu0.1", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" }, { "shlib": "libgomp", "package": "libgomp1", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "openmp", "homepage": "http://gcc.gnu.org/", "description": "GCC OpenMP (GOMP) support library" } ], "_score": 1, "_indexed": false, "_nocasepkg": "bayenet", "_universes": [ "cran" ], "_indexurl": "https://xilustat.r-universe.dev/Bayenet", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.3", "date": "2026-06-09T09:48:12.000Z", "distro": "noble", "arch": "aarch64", "commit": "a76e7fe956bfeb344e91ec78c7b2ddf175bc38ad", "fileid": "edd33839f2442db85c1123c8dab4406c20b8783b22856dfeacc61a69c4e6019e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27197663193" }, { "r": "4.7.0", "os": "linux", "version": "0.3", "date": "2026-06-09T09:48:13.000Z", "distro": "noble", "arch": "x86_64", "commit": "a76e7fe956bfeb344e91ec78c7b2ddf175bc38ad", "fileid": "2814a013a732e188864d42e7d53a66618d2f2c00980de862f849c8635579fd30", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27197663193" }, { "r": "4.6.0", "os": "linux", "version": "0.3", "date": "2026-06-09T09:48:33.000Z", "distro": "noble", "arch": "aarch64", "commit": "a76e7fe956bfeb344e91ec78c7b2ddf175bc38ad", "fileid": "336ade37c2a97d7b4b78cbab85dc18890149508b31a14f9695fad540e2cd11db", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27197663193" }, { "r": "4.6.0", "os": "linux", "version": "0.3", "date": "2026-06-09T09:48:05.000Z", "distro": "noble", "arch": "x86_64", "commit": "a76e7fe956bfeb344e91ec78c7b2ddf175bc38ad", "fileid": "f0dac0ab6f1ceb83d352a3ef39772bd267ea19092ac1060f901f361873d31aac", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/27197663193" }, { "r": "4.6.0", "os": "wasm", "version": "0.3", "date": "2026-06-09T09:48:16.000Z", "arch": "emscripten", "commit": "a76e7fe956bfeb344e91ec78c7b2ddf175bc38ad", "fileid": "79bd055aa653a53bf9421ddc2114e993e0dc18244ff51bb403703a01d21a190c", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/27197663193" } ] }