{ "_id": "6ac613fdf511ae58c09a5ad3", "Package": "BMIselect", "Title": "Bayesian MI-LASSO for Variable Selection on Multiply-Imputed\nDatasets", "Version": "1.0.10", "Authors@R": "c(person(\"Jungang\", \"Zou\", email = \"jungang.zou@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(given = \"Sijian\",\nfamily = \"Wang\",\nrole = c(\"aut\")\n),\nperson(given = \"Qixuan\",\nfamily = \"Chen\",\nrole = c(\"aut\")\n))", "Maintainer": "Jungang Zou ", "Description": "Provides a suite of Bayesian MI-LASSO for variable\nselection methods for multiply-imputed datasets. The package\nincludes four Bayesian MI-LASSO models using shrinkage\n(Multi-Laplace, Horseshoe, ARD) and Spike-and-Slab\n(Spike-and-Laplace) priors, along with tools for model fitting\nvia MCMC, four-step projection predictive variable selection,\nand hyperparameter calibration. Methods are suitable for both\ncontinuous and binary covariates under missing-at-random or\nmissing-completely-at-random assumptions. See Zou, J., Wang, S.\nand Chen, Q. (2025), Bayesian MI-LASSO for Variable Selection\non Multiply-Imputed Data. ArXiv, 2211.00114.\n for more details. We also\nprovide the frequentist MI-LASSO function.", "License": "Apache License (>= 2)", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-10-07 09:34:04 UTC", "User": "root" }, "Author": "Jungang Zou [aut, cre], Sijian Wang [aut], Qixuan Chen [aut]", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2026-10-07 08:52:30 UTC", "RemoteUrl": "https://github.com/cran/BMIselect", "RemoteRef": "HEAD", "RemoteSha": "fcba7e3ff60c99cf28b9379ed883814932572563", "_user": "cran", "_type": "src", "_file": "BMIselect_1.0.10.tar.gz", "_fileid": "https://r2.ropensci.org/57651deb40be135957773ea5d17168db3db4148f3add10a4863c28bb6612f936", "_filesize": 216077, "_sha256": "57651deb40be135957773ea5d17168db3db4148f3add10a4863c28bb6612f936", "_expires": "2027-01-15T09:42:19.000Z", "_created": "2026-10-07T09:34:04.000Z", "_published": "2026-10-07T09:42:21.868Z", "_buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 112727026744, "time": 173, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "11473566008" }, { "job": 112727026430, "time": 165, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11472868568" }, { "job": 112727026656, "time": 181, "config": "linux-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11472364737" }, { "job": 112727026468, "time": 143, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11472394844" }, { "job": 112721780469, "time": 317, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11473366059" }, { "job": 112727026270, "time": 150, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11472519584" }, { "job": 112727026416, "time": 262, "config": "windows-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "11472684060" }, { "job": 112727026417, "time": 163, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11473526572" }, { "job": 112727026387, "time": 229, "config": "windows-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11473221933" }, { "job": 112727026518, "time": 166, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11472354960" } ], "_upstream": "https://github.com/cran/BMIselect", "_commit": { "id": "fcba7e3ff60c99cf28b9379ed883814932572563", "author": "Jungang Zou ", "committer": "cran-robot ", "message": "version 1.0.10\n", "time": 1791363150 }, "_maintainer": { "name": "Jungang Zou", "email": "jungang.zou@gmail.com", "login": "zjg540066169", "description": "I am a Ph.D. student of Biostatistics at Columbia University. My research focuses on Bayesian statistics and missing data.", "uuid": 18543895 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "Rcpp", "role": "Imports" }, { "package": "MASS", "role": "Imports" }, { "package": "Rfast", "role": "Imports" }, { "package": "foreach", "role": "Imports" }, { "package": "doParallel", "role": "Imports" }, { "package": "parallel", "role": "Imports" }, { "package": "arm", "role": "Imports" }, { "package": "mice", "role": "Imports" }, { "package": "abind", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "posterior", "role": "Imports" }, { "package": "loo", "role": "Imports" }, { "package": "testthat", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2026-28", "n": 1 }, { "week": "2026-34", "n": 1 }, { "week": "2026-41", "n": 1 } ], "_tags": [ { "name": "1.0.4", "date": "2026-07-09" }, { "name": "1.0.9", "date": "2026-08-21" }, { "name": "1.0.10", "date": "2026-10-07" } ], "_stars": 0, "_contributors": [ { "user": "zjg540066169", "count": 6, "uuid": 18543895 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 630, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 387, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BMIselect" }, "_searchresults": 3, "_topics": [ "openblas", "cpp", "openmp" ], "_rbuild": "4.6.1", "_assets": [ "extra/BMIselect.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf" ], "_homeurl": "https://github.com/zjg540066169/bmiselect", "_realowner": "zjg540066169", "_cranurl": false, "_releases": [ { "version": "1.0.1", "date": "2025-07-09" }, { "version": "1.0.2", "date": "2025-08-20" }, { "version": "1.0.3", "date": "2025-08-25" }, { "version": "1.0.4", "date": "2026-07-09" }, { "version": "1.0.9", "date": "2026-08-21" } ], "_exports": [ "BMI_LASSO", "MI_LASSO", "sim_A", "sim_B", "sim_C" ], "_help": [ { "page": "BMI_LASSO", "title": "Bayesian MI-LASSO for Multiply-Imputed Regression", "topics": [ "BMI_LASSO" ] }, { "page": "MI_LASSO", "title": "Multiple-Imputation LASSO (MI-LASSO)", "topics": [ "MI_LASSO" ] }, { "page": "sim_A", "title": "Simulate dataset A: Independent continuous covariates with MCAR/MAR missingness", "topics": [ "sim_A" ] }, { "page": "sim_B", "title": "Simulate dataset B: AR(1)-correlated continuous covariates with MCAR/MAR missingness", "topics": [ "sim_B" ] }, { "page": "sim_C", "title": "Simulate dataset C: AR(1)-latent Gaussian dichotomized to binary covariates with MCAR/MAR missingness", "topics": [ "sim_C" ] } ], "_rundeps": [ "abind", "arm", "backports", "bit", "bit64", "boot", "broom", "checkmate", "cli", "clipr", "coda", "codetools", "cpp11", "crayon", "distributional", "doParallel", "dplyr", "forcats", "foreach", "generics", "glmnet", "glue", "haven", "hms", "iterators", "jomo", "lattice", "lifecycle", "lme4", "loo", "magrittr", "MASS", "Matrix", "matrixStats", "mice", "minqa", "mitml", "nlme", "nloptr", "nnet", "numDeriv", "ordinal", "pan", "pillar", "pkgconfig", "posterior", "prettyunits", "progress", "purrr", "R6", "rbibutils", "Rcpp", "RcppArmadillo", "RcppEigen", "RcppParallel", "Rdpack", "readr", "reformulas", "Rfast", "rlang", "rpart", "shape", "stringi", "stringr", "survival", "tensorA", "tibble", "tidyr", "tidyselect", "tzdb", "ucminf", "utf8", "vctrs", "vroom", "withr", "zigg" ], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.32+ds-5", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.32+ds-5", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" }, { "shlib": "libgomp", "package": "libgomp1", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "openmp", "homepage": "http://gcc.gnu.org/", "description": "GCC OpenMP (GOMP) support library" } ], "_vignettes": [ { "source": "Introduction.Rmd", "filename": "Introduction.html", "title": "An Introduction to BMIselect", "author": "Jungang Zou", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Limitations", "Data Preparation", "Variable Selection Using Bayesian MI-LASSO", "Example of Horseshoe model", "Hyperparameters Specification", "Parallel Computing for Multiple Chains", "Frequentists MI-LASSO", "Disclaimer" ], "created": "2025-08-25 13:20:13", "modified": "2026-10-07 08:52:30", "commits": 4 } ], "_score": 2.4771212547196626, "_indexed": false, "_nocasepkg": "bmiselect", "_universes": [ "cran" ], "_indexurl": "https://zjg540066169.r-universe.dev/BMIselect", "_previous": "1.0.9", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.10", "date": "2026-10-07T09:36:56.000Z", "distro": "resolute", "arch": "aarch64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/7d5105aea903cba7f56d06c75ed56597676ab1d93ab011e1c539b0835236c501", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.7.0", "os": "linux", "version": "1.0.10", "date": "2026-10-07T09:38:56.000Z", "distro": "resolute", "arch": "x86_64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/fd18e41cb803d0ab26709845b87fbb4f4e77c225b65226a8196320b98d4a7803", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.6.1", "os": "linux", "version": "1.0.10", "date": "2026-10-07T09:37:07.000Z", "distro": "resolute", "arch": "aarch64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/68b386907fe1c70ece469b90e826128f3a0b9875d4a2332a0200e05f8e460bf4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.6.1", "os": "linux", "version": "1.0.10", "date": "2026-10-07T09:38:44.000Z", "distro": "resolute", "arch": "x86_64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/a4f5afb612ba8a1becddd00799b6cc76df02ebdce113bb2dac52e699e71ed15a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.10", "date": "2026-10-07T09:39:03.000Z", "arch": "emscripten", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/5de9f600e9b0b69a35a99786b5802a94c04f060380e8fca7f6e5422ac020ad25", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.7.0", "os": "win", "version": "1.0.10", "date": "2026-10-07T09:38:07.000Z", "arch": "aarch64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/848479dadfa4e886e1999f455840500d4d8876b1a6d9b910366a8e6b2882f6f2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.7.0", "os": "win", "version": "1.0.10", "date": "2026-10-07T09:35:47.000Z", "arch": "x86_64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/bc375bcd69a501f2fadc00a2609a19c612579170d9a881d41f481c885f22fe00", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.6.1", "os": "win", "version": "1.0.10", "date": "2026-10-07T09:37:40.000Z", "arch": "aarch64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/9a90f5b6db8a06dafbdd6894b252e7d48e504de50a0a739c52dbf6d776dd992a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" }, { "r": "4.6.1", "os": "win", "version": "1.0.10", "date": "2026-10-07T09:36:10.000Z", "arch": "x86_64", "commit": "fcba7e3ff60c99cf28b9379ed883814932572563", "fileid": "https://r2.ropensci.org/7e2a3d7ffea5ebf4126969ebb4533fe79eeea53f5714e31a0300c4f6cf73e1fb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cran/actions/runs/37599159027" } ] }