{ "_id": "6adb219709e55c840020854b", "Package": "Achilles", "Type": "Package", "Title": "Achilles Data Source Characterization", "Version": "1.7.2", "Date": "2023-05-11", "Authors@R": "c(\nperson(\"Frank\", \"DeFalco\", email = \"fdefalco@ohdsi.org\", role = c(\"aut\",\"cre\")),\nperson(\"Patrick\", \"Ryan\", email = \"ryan@ohdsi.org\", role = c(\"aut\")),\nperson(\"Martijn\", \"Schuemie\", email = \"schuemie@ohdsi.org\", role = c(\"aut\")),\nperson(\"Vojtech\", \"Huser\", role = c(\"aut\")),\nperson(\"Chris\", \"Knoll\", role = c(\"aut\")),\nperson(\"Ajit\", \"Londhe\", email = \"londhe@ohdsi.org\", role = c(\"aut\")),\nperson(\"Taha\", \"Abdul-Basser\", role = c(\"aut\")),\nperson(\"Anthony\", \"Molinaro\", role = c(\"aut\")),\nperson(\"Observational Health Data Science and Informatics\", role = c(\"cph\"))\n)", "Maintainer": "Frank DeFalco ", "Description": "Automated Characterization of Health Information at\nLarge-Scale Longitudinal Evidence Systems. Creates a\ndescriptive statistics summary for an Observational Medical\nOutcomes Partnership Common Data Model standardized data\nsource. This package includes functions for executing summary\nqueries on the specified data source and exporting reporting\ncontent for use across a variety of Observational Health Data\nSciences and Informatics community applications.", "VignetteBuilder": "knitr", "License": "Apache License", "RoxygenNote": "7.2.3", "Encoding": "UTF-8", "Config/testthat/edition": "3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-23 08:54:33 UTC", "User": "root" }, "Author": "Frank DeFalco [aut, cre], Patrick Ryan [aut], Martijn Schuemie\n[aut], Vojtech Huser [aut], Chris Knoll [aut], Ajit Londhe\n[aut], Taha Abdul-Basser [aut], Anthony Molinaro [aut],\nObservational Health Data Science and Informatics [cph]", "Repository": "https://cran.r-universe.dev", "Date/Publication": "2023-05-11 15:50:02 UTC", "RemoteUrl": "https://github.com/cran/Achilles", "RemoteRef": "HEAD", "RemoteSha": "70772a19cf7d43b8c453f638fc874b80dd7e3b08", "_user": "cran", "_type": "src", "_file": "Achilles_1.7.2.tar.gz", "_fileid": "https://r2.ropensci.org/dae8957e0dd545b9bfad8ccaa20249fc125a54b2d5256766c1301eb864377bcf", "_filesize": 668176, "_sha256": "dae8957e0dd545b9bfad8ccaa20249fc125a54b2d5256766c1301eb864377bcf", "_expires": "2027-01-31T08:57:57.000Z", "_created": "2026-10-23T08:54:33.000Z", "_published": "2026-10-23T08:57:59.479Z", "_upstream": "https://github.com/cran/Achilles", "_status": "success", "_maintainer": { "name": "Frank DeFalco", "email": "fdefalco@ohdsi.org", "login": "fdefalco", "description": "Computational Epidemiologist at Johnson & Johnson", "uuid": 6586384 }, "_jobs": [ { "job": 120329209866, "time": 162, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "12490720753" }, { "job": 120329209670, "time": 154, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "12490820935" }, { "job": 120327978460, "time": 187, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12490830468" }, { "job": 120329209729, "time": 145, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12489814281" }, { "job": 120329209626, "time": 124, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "12490830867" }, { "job": 120329209650, "time": 109, "config": "windows-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "12490097295" } ], "_buildurl": "https://github.com/r-universe/cran/actions/runs/39927633976", "_commit": { "id": "70772a19cf7d43b8c453f638fc874b80dd7e3b08", "author": "Frank DeFalco ", "committer": "cran-robot ", "message": "version 1.7.2\n", "time": 1683820202 }, "_distro": "resolute", "_host": "GitHub-Actions", "_registered": true, "_dependencies": [ { "package": "DatabaseConnector", "version": ">= 2.0.0", "role": "Depends" }, { "package": "R", "version": ">= 4.0.0", "role": "Depends" }, { "package": "SqlRender", "version": ">= 1.6.0", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "jsonlite", "role": "Imports" }, { "package": "ParallelLogger", "role": "Imports" }, { "package": "readr", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "lubridate", "role": "Imports" }, { "package": "tseries", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "DT", "role": "Suggests" }, { "package": "magrittr", "role": "Suggests" }, { "package": "tidyr", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "withr", "role": "Suggests" } ], "_owner": "cran", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "fdefalco", "count": 2, "uuid": 6586384 } ], "_userbio": { "uuid": 6899542, "type": "organization", "name": "cran", "followers": 634, "description": "Unofficial read-only mirror of all CRAN R packages" }, "_downloads": { "count": 690, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/Achilles" }, "_searchresults": 195, "_topics": [ "openjdk" ], "_rbuild": "4.6.1", "_assets": [ "extra/Achilles.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_realowner": "fdefalco", "_cranurl": false, "_releases": [ { "version": "1.7.1", "date": "2023-05-03" }, { "version": "1.7.2", "date": "2023-05-11" } ], "_exports": [ "achilles", "createIndices", "createTimeSeries", "dropAllScratchTables", "exportConditionEraToJson", "exportConditionToJson", "exportDashboardToJson", "exportDataDensityToJson", "exportDeathToJson", "exportDrugEraToJson", "exportDrugToJson", "exportMeasurementToJson", "exportMetaToJson", "exportObservationPeriodToJson", "exportObservationToJson", "exportPerformanceToJson", "exportPersonToJson", "exportProcedureToJson", "exportResultsToCSV", "exportToAres", "exportToJson", "exportVisitDetailToJson", "exportVisitToJson", "getAnalysisDetails", "getSeasonalityScore", "getTemporalData", "isStationary", "listMissingAnalyses", "optimizeAtlasCache", "performTemporalCharacterization", "runMissingAnalyses", "showReportTypes", "sumAcrossYears", "tsCompleteYears" ], "_help": [ { "page": "achilles", "title": "achilles", "topics": [ "achilles" ] }, { "page": "createIndices", "title": "Create indicies", "topics": [ "createIndices" ] }, { "page": "createTimeSeries", "title": "createTimeSeries", "topics": [ "createTimeSeries" ] }, { "page": "dropAllScratchTables", "title": "Drop all possible scratch tables", "topics": [ "dropAllScratchTables" ] }, { "page": "exportConditionEraToJson", "title": "exportConditionEraToJson", "topics": [ "exportConditionEraToJson" ] }, { "page": "exportConditionToJson", "title": "exportConditionToJson", "topics": [ "exportConditionToJson" ] }, { "page": "exportDashboardToJson", "title": "exportDashboardToJson", "topics": [ "exportDashboardToJson" ] }, { "page": "exportDataDensityToJson", "title": "exportDataDensityToJson", "topics": [ "exportDataDensityToJson" ] }, { "page": "exportDeathToJson", "title": "exportDeathToJson", "topics": [ "exportDeathToJson" ] }, { "page": "exportDrugEraToJson", "title": "exportDrugEraToJson", "topics": [ "exportDrugEraToJson" ] }, { "page": "exportDrugToJson", "title": "exportDrugToJson", "topics": [ "exportDrugToJson" ] }, { "page": "exportMeasurementToJson", "title": "exportMeasurementToJson", "topics": [ "exportMeasurementToJson" ] }, { "page": "exportMetaToJson", "title": "exportMetaToJson", "topics": [ "exportMetaToJson" ] }, { "page": "exportObservationPeriodToJson", "title": "exportObservationPeriodToJson", "topics": [ "exportObservationPeriodToJson" ] }, { "page": "exportObservationToJson", "title": "exportObservationToJson", "topics": [ "exportObservationToJson" ] }, { "page": "exportPerformanceToJson", "title": "exportPerformanceToJson exportPerformanceToJson", "topics": [ "exportPerformanceToJson" ] }, { "page": "exportPersonToJson", "title": "exportPersonToJson", "topics": [ "exportPersonToJson" ] }, { "page": "exportProcedureToJson", "title": "exportProcedureToJson", "topics": [ "exportProcedureToJson" ] }, { "page": "exportResultsToCSV", "title": "exportResultsToCSV", "topics": [ "exportResultsToCSV" ] }, { "page": "exportToAres", "title": "exportToAres", "topics": [ "exportToAres" ] }, { "page": "exportToJson", "title": "exportToJson", "topics": [ "exportToJson" ] }, { "page": "exportVisitDetailToJson", "title": "exportVisitDetailToJson", "topics": [ "exportVisitDetailToJson" ] }, { "page": "exportVisitToJson", "title": "exportVisitToJson", "topics": [ "exportVisitToJson" ] }, { "page": "getAnalysisDetails", "title": "Get all analysis details", "topics": [ "getAnalysisDetails" ] }, { "page": "getSeasonalityScore", "title": "Get the seasonality score for a given monthly time series", "topics": [ "getSeasonalityScore" ] }, { "page": "getTemporalData", "title": "getTemporalData", "topics": [ "getTemporalData" ] }, { "page": "isStationary", "title": "Determine whether or not a time series is stationary in the mean", "topics": [ "isStationary" ] }, { "page": "listMissingAnalyses", "title": "listMissingAnalyses", "topics": [ "listMissingAnalyses" ] }, { "page": "optimizeAtlasCache", "title": "Optimize atlas cache", "topics": [ "optimizeAtlasCache" ] }, { "page": "performTemporalCharacterization", "title": "performTemporalCharacterization", "topics": [ "performTemporalCharacterization" ] }, { "page": "runMissingAnalyses", "title": "runMissingAnalyses", "topics": [ "runMissingAnalyses" ] }, { "page": "showReportTypes", "title": "showReportTypes", "topics": [ "showReportTypes" ] }, { "page": "sumAcrossYears", "title": "For a monhtly time series, compute sum and proportion by month across all years", "topics": [ "sumAcrossYears" ] }, { "page": "tsCompleteYears", "title": "Trim a monthly time series object to so that partial years are removed", "topics": [ "tsCompleteYears" ] } ], "_readme": "https://github.com/cran/Achilles/raw/HEAD/README.md", "_rundeps": [ "backports", "bit", "bit64", "blob", "checkmate", "cli", "clipr", "cpp11", "crayon", "curl", "data.table", "DatabaseConnector", "DBI", "dbplyr", "digest", "dplyr", "generics", "glue", "hms", "jsonlite", "lattice", "lifecycle", "lubridate", "magrittr", "memuse", "ParallelLogger", "pillar", "pkgconfig", "prettyunits", "progress", "purrr", "quadprog", "quantmod", "R6", "Rcpp", "readr", "rJava", "rlang", "rstudioapi", "snow", "SqlRender", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "timechange", "triebeard", "tseries", "TTR", "tzdb", "urltools", "utf8", "vctrs", "vroom", "withr", "xml2", "xts", "zoo" ], "_sysdeps": [ { "shlib": "libjvm", "package": "openjdk-25-jre-headless", "headers": "openjdk-25-jre-headless", "source": "openjdk", "version": "25.0.4.1+1-1~26.04.4", "name": "openjdk", "homepage": "https://openjdk.java.net/", "description": "OpenJDK Java runtime, using Hotspot JIT (headless)" } ], "_vignettes": [ { "source": "GettingStarted.Rmd", "filename": "GettingStarted.html", "title": "Getting Started with Achilles", "engine": "knitr::rmarkdown", "headings": [ "Installation", "Running Achilles", "Developers: How to Add or Modify Analyses", "License" ], "created": "2023-05-03 17:15:35", "modified": "2023-05-03 17:15:35", "commits": 1 }, { "source": "RunningAchilles.Rmd", "filename": "RunningAchilles.html", "title": "Running Achilles on Your CDM", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "General Approach", "SQL Only Mode", "Logging", "Verbose Mode", "Preparation for running Achilles", "Multi-Threaded vs Single-Threaded", "Achilles Parameters (Both Modes)", "Staging Table Prefix", "Source Name", "Create Table", "Limiting the Analyses", "Cost Analyses", "Small Cell Count", "Drop Scratch Tables", "Create Indices", "Return Value", "Running Achilles: Single-Threaded Mode", "Running Achilles: Multi-Threaded Mode", "Post-Processing", "Creating Indices", "Dropping All Staging Tables (Multi-threaded only)", "Acknowledgments" ], "created": "2023-05-03 17:15:35", "modified": "2023-05-03 17:15:35", "commits": 1 } ], "_score": 4.290034611362518, "_indexed": false, "_nocasepkg": "achilles", "_universes": [ "cran" ], "_indexurl": "https://fdefalco.r-universe.dev/Achilles", "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.7.2", "date": "2026-10-23T08:57:02.000Z", "distro": "resolute", "commit": "70772a19cf7d43b8c453f638fc874b80dd7e3b08", "fileid": "https://r2.ropensci.org/2f0f3ea94fa9df8296441ba23b56afcaa972df1c6b402767bd833c21f76cc365", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/cran/actions/runs/39927633976" }, { "r": "4.6.1", "os": "linux", "version": "1.7.2", "date": "2026-10-23T08:57:00.000Z", "distro": "resolute", "commit": "70772a19cf7d43b8c453f638fc874b80dd7e3b08", "fileid": "https://r2.ropensci.org/cb61957fad533577d13566654b27a521df3af864adfae99213729a38b68db69f", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/cran/actions/runs/39927633976" }, { "r": "4.6.0", "os": "wasm", "version": "1.7.2", "date": "2026-10-23T08:57:17.000Z", "commit": "70772a19cf7d43b8c453f638fc874b80dd7e3b08", "fileid": "https://r2.ropensci.org/e760a6644b1f7c3310765df065bde455446a726f60b98eb99608019d2ecc5cda", "status": "success", "buildurl": "https://github.com/r-universe/cran/actions/runs/39927633976" }, { "r": "4.7.0", "os": "win", "version": "1.7.2", "date": "2026-10-23T08:55:57.000Z", "commit": "70772a19cf7d43b8c453f638fc874b80dd7e3b08", "fileid": "https://r2.ropensci.org/d1af17ba99a7a5d67f7af88bd499dbdac4b453f6dd22335a34fcc862f7ba5056", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/cran/actions/runs/39927633976" }, { "r": "4.6.1", "os": "win", "version": "1.7.2", "date": "2026-10-23T08:55:51.000Z", "commit": "70772a19cf7d43b8c453f638fc874b80dd7e3b08", "fileid": "https://r2.ropensci.org/e7a7f5298bdaafd18ab236b7e6d4110b08cac79e84b999c63e8609c5387ea44f", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/cran/actions/runs/39927633976" } ] }