Package: VIProDesign
Type: Package
Title: A Comprehensive Tool for Protein Design
Version: 0.1.0
Authors@R: c(person("Tatsiana", "Bylund", email = "tatsiana.bylund@nih.gov", role = c("aut", "cre")))
Description: Provides tools for designing virus protein panels through
        sequence clustering and protein sequence analysis. The package
        includes functionality for filtering sequences, removing
        redundancy, identifying outliers, clustering sequences, and
        calculating entropy to evaluate clustering quality. A
        publication describing these methods is in preparation and will
        be added once available.
License: Apache License 2.0
Encoding: UTF-8
RoxygenNote: 7.3.2
Imports: Biostrings, DECIPHER, cluster, pathviewr, dbscan, ape
Suggests: optparse
NeedsCompilation: no
Packaged: 2026-09-19 10:45:20 UTC; root
Author: Tatsiana Bylund [aut, cre]
Maintainer: Tatsiana Bylund <tatsiana.bylund@nih.gov>
Config/pak/sysreqs: zlib1g-dev
Repository: https://cran.r-universe.dev
Date/Publication: 2025-05-02 09:30:09 UTC
RemoteUrl: https://github.com/cran/VIProDesign
RemoteRef: HEAD
RemoteSha: 3f88c1db2bb3a53bf7f3dc18d81e28374fbe6df5