Package: TriadSim
Title: Simulating Triad Genomewide Genotypes
Version: 0.3.1
Authors@R: person("Min", "Shi", email = "shi2@niehs.nih.gov", role = c("aut", "cre"))
Description: Simulate genotypes for case-parent triads, case-control,
        and quantitative trait samples with realistic linkage
        diequilibrium structure and allele frequency distribution. For
        studies of epistasis one can simulate models that involve
        specific SNPs at specific sets of loci, which we will refer to
        as "pathways". TriadSim generates genotype data by resampling
        triad genotypes from existing data. The details of the method
        is described in the manuscript under preparation "Simulating
        Autosomal Genotypes with Realistic Linkage Disequilibrium and a
        Spiked in Genetic Effect" Shi, M., Umbach, D.M., Wise A.S.,
        Weinberg, C.R.
Depends: R (>= 3.2.2)
License: GPL-3
biocViews: snpStats
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Imports: methods, parallel, snpStats, foreach, doParallel
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Author: Min Shi [aut, cre]
Maintainer: Min Shi <shi2@niehs.nih.gov>
Packaged: 2026-06-22 09:56:47 UTC; root
Config/pak/sysreqs: zlib1g-dev
Repository: https://cran.r-universe.dev
Date/Publication: 2026-02-22 14:00:02 UTC
RemoteUrl: https://github.com/cran/TriadSim
RemoteRef: HEAD
RemoteSha: 2d2760ab7526cfbbed8894c2b95bd183d27e73d2