Package: SmartSVA
Type: Package
Title: Fast and Robust Surrogate Variable Analysis
Version: 0.1.3
Author: Jun Chen <Chen.Jun2@mayo.edu>, Ehsan Behnam <behnamgh@usc.edu>
Maintainer: Jun Chen <Chen.Jun2@mayo.edu>
Description: Introduces a fast and efficient Surrogate Variable
        Analysis algorithm that captures variation of unknown sources
        (batch effects) for high-dimensional data sets. The algorithm
        is built on the 'irwsva.build' function of the 'sva' package
        and proposes a revision on it that achieves an order of
        magnitude faster running time while trading no accuracy loss in
        return.
License: GPL-3
Depends: R (>= 3.1.0), sva, isva, RSpectra
Imports: Rcpp, stats, utils
LinkingTo: Rcpp, RcppEigen
Encoding: UTF-8
NeedsCompilation: yes
Packaged: 2026-09-29 09:05:06 UTC; root
Config/pak/sysreqs: zlib1g-dev
Repository: https://cran.r-universe.dev
Date/Publication: 2017-05-28 06:22:56 UTC
RemoteUrl: https://github.com/cran/SmartSVA
RemoteRef: HEAD
RemoteSha: f191d02cbb274a7ae6474efe62174a5554f07a2e