Package: SimBIID Title: Simulation-Based Inference Methods for Infectious Disease Models Version: 0.2.2 Authors@R: c(person("Trevelyan J.", "McKinley", email = "t.mckinley@exeter.ac.uk", role = c("aut", "cre")), person("Stefan", "Widgren", role = "aut", email = "stefan.widgren@gmail.com", comment = "Author of 'R/mparse.R'"), person("Pavol", "Bauer", role = "cph", comment = 'R/mparse.R'), person("Robin", "Eriksson", role = "cph", comment = 'R/mparse.R'), person("Stefan", "Engblom", role = "cph", comment = 'R/mparse.R')) Description: Provides some code to run simulations of state-space models, and then use these in the Approximate Bayesian Computation Sequential Monte Carlo (ABC-SMC) algorithm of Toni et al. (2009) and a bootstrap particle filter based particle Markov chain Monte Carlo (PMCMC) algorithm (Andrieu et al., 2010 ). Also provides functions to plot and summarise the outputs. License: GPL (>= 3) URL: https://github.com/tjmckinley/SimBIID BugReports: https://github.com/tjmckinley/SimBIID/issues Depends: R (>= 3.5) Imports: stats, dplyr, purrr, tibble, ggplot2, tidyr, mvtnorm, grDevices, RColorBrewer, Rcpp, RcppXPtrUtils, coda Suggests: parallel, GGally, testthat LinkingTo: Rcpp, RcppArmadillo Config/testthat/edition: 3 Encoding: UTF-8 LazyData: true RoxygenNote: 7.3.2 NeedsCompilation: yes Packaged: 2026-11-02 12:26:37 UTC; root Author: Trevelyan J. McKinley [aut, cre], Stefan Widgren [aut] (Author of 'R/mparse.R'), Pavol Bauer [cph] (R/mparse.R), Robin Eriksson [cph] (R/mparse.R), Stefan Engblom [cph] (R/mparse.R) Maintainer: Trevelyan J. McKinley Repository: https://cran.r-universe.dev Date/Publication: 2025-04-03 10:20:02 UTC RemoteUrl: https://github.com/cran/SimBIID RemoteRef: HEAD RemoteSha: c3b97950491b4b920c730814fe7a5446819b15cc