Changes in version 1.0.1 (2026-10-22)                  

  - Initial release: offline CAPS, single-substitution site-creation
    dCAPS, conventional two-reaction ARMS and tetra-primer ARMS
    candidate design.
  - Evaluate perfect-match primer thermodynamics, sequence compatibility
    and theoretical complete digests with explicit uncertainty and
    search limits.
  - Provide source-linked coordinate and band schematics, within-method
    preference ranking, reproducible exports and an optional local Shiny
    interface.
  - Apply tetra-primer product-size bounds to the control and both
    diagnostic products; retain separate broad pairwise risk screening.
  - Include runnable public-API examples and regenerable computational
    references.
  - Expand the source-verified enzyme panel to 20 distinct motifs,
    including MfeI-HF.
  - Add an offline 550-bp synthetic teaching locus and practical-length
    workflows for CAPS, dCAPS, conventional ARMS and tetra-primer ARMS.
  - Provide a version-specific software citation through
    citation("SNPAssayR").
  - Record ICAR-Indian Institute of Rapeseed-Mustard Research
    (ICAR-IIRMR) as copyright holder while retaining the three authors
    and designated maintainer.