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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SMASH" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'SMASH: Subclone Multiplicity Allocation and Somatic Heterogeneity'
version: 1.0.0
doi: 10.1186/s13073-019-0643-9
identifiers:
- type: doi
  value: 10.32614/CRAN.package.SMASH
abstract: Cluster user-supplied somatic read counts with corresponding allele-specific
  copy number and tumor purity to infer feasible underlying intra-tumor heterogeneity
  in terms of number of subclones, multiplicity, and allocation (Little et al. (2019)
  <https://doi.org/10.1186/s13073-019-0643-9>).
authors:
- family-names: Little
  given-names: Paul
  email: pllittle321@gmail.com
preferred-citation:
  type: article
  title: 'Associating somatic mutations to clinical outcomes: a pan-cancer study of
    survival time'
  authors:
  - family-names: Little
    given-names: Paul
    email: pllittle321@gmail.com
    orcid: https://orcid.org/0000-0002-9789-8501
  - family-names: Lin
    given-names: Dan Yu
    email: lin@bios.unc.edu
  - family-names: Sun
    given-names: Wei
    email: wsun@fredhutch.org
    orcid: https://orcid.org/0000-0002-6350-1107
  journal: Genome Medicine
  year: '2019'
  volume: '11'
  issue: '1'
  doi: 10.1186/s13073-019-0643-9
  start: '1'
  end: '15'
repository: https://CRAN.R-project.org/package=SMASH
date-released: '2025-02-07'
contact:
- family-names: Little
  given-names: Paul
  email: pllittle321@gmail.com