Package: SIEVEseq
Title: Unified Differential Expression, Variability and Skewness
        Analysis for RNA-Seq Data
Version: 0.0.0
Date: 2026-06-07
Authors@R: c(
    person("Hongxiang", "Li", email = "hxli@ynnu.edu.cn", role = c("aut", "cre")),
    person("Tsung Fei", "Khang", email = "tfkhang@um.edu.my", role = "aut"))
Maintainer: Hongxiang Li <hxli@ynnu.edu.cn>
Description: Provides a unified framework for the simultaneous testing
        of differential expression, variability, and skewness of genes
        using RNA-Seq data. The framework adopts a compositional data
        analysis approach for modelling RNA-Seq count data, applies the
        centered log-ratio transformation to obtain continuous
        variables, and uses the skew-normal distribution for
        statistical inference. Methods are described in Li and Khang
        (bioRxiv preprint, 2024, version 3)
        <doi:10.1101/2024.04.09.588804>.
Depends: R (>= 4.1)
Imports: sn, stats, ggplot2
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
URL: https://github.com/Divo-Lee/SIEVEseq
License: GPL (>= 2)
Encoding: UTF-8
LazyData: TRUE
Config/roxygen2/version: 8.0.0
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-06-25 19:58:19 UTC; root
Author: Hongxiang Li [aut, cre], Tsung Fei Khang [aut]
Repository: https://cran.r-universe.dev
Date/Publication: 2026-06-25 18:28:45 UTC
RemoteUrl: https://github.com/cran/SIEVEseq
RemoteRef: HEAD
RemoteSha: c610429b4510de96c06dafb247cbf88841564a92