Package: SAFEMCN
Type: Package
Title: Network Topology Parameter Analysis with Rarefaction
Version: 1.0.0
Authors@R: c(
    person("Xiaotong", "Xu", email = "xxt19992014@163.com", role = c("aut", "cre")),
    person("Yue", "Zheng", role = "cph")
  )
Description: Calculate network topology parameters from Operational
        Taxonomic Unit (OTU) tables with customizable correlation
        thresholds, parallel processing options, and visualization
        capabilities including trend fitting, prediction of future
        sample sizes, and lag-1 autocorrelation (AR1) analysis. Methods
        are based on co-occurrence network construction via correlation
        thresholds and graph-theoretic metrics computed with 'igraph'.
License: MIT + file LICENSE
Encoding: UTF-8
Depends: R (>= 3.5.0)
Imports: igraph, Hmisc, parallel, ggplot2, grDevices, graphics, rlang,
        stats, utils
Suggests: testthat (>= 3.0.0)
Config/testthat/edition: 3
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-07-03 14:00:40 UTC; root
Author: Xiaotong Xu [aut, cre], Yue Zheng [cph]
Maintainer: Xiaotong Xu <xxt19992014@163.com>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-05-28 17:05:28 UTC
RemoteUrl: https://github.com/cran/SAFEMCN
RemoteRef: HEAD
RemoteSha: 9be087a50f457612f755ddeb5b779b9c7784deba