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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ROKET" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'ROKET: Optimal Transport-Based Kernel Regression'
version: 1.0.0
doi: 10.1111/biom.13769
identifiers:
- type: doi
  value: 10.32614/CRAN.package.ROKET
abstract: Perform optimal transport on somatic point mutations and kernel regression
  hypothesis testing by integrating pathway level similarities at the gene level (Little
  et al. (2023) <https://doi.org/10.1111/biom.13769>). The software implements balanced
  and unbalanced optimal transport and omnibus tests with 'C++' across a set of tumor
  samples and allows for multi-threading to decrease computational runtime.
authors:
- family-names: Little
  given-names: Paul
  email: pllittle321@gmail.com
preferred-citation:
  type: article
  title: Associating somatic mutation with clinical outcomes through kernel regression
    and optimal transport
  authors:
  - family-names: Little
    given-names: Paul
    email: pllittle321@gmail.com
    orcid: https://orcid.org/0000-0002-9789-8501
  - family-names: Hsu
    given-names: Li
    email: lih@fredhutch.org
    orcid: https://orcid.org/0000-0001-8168-4712
  - family-names: Sun
    given-names: Wei
    email: wsun@fredhutch.org
    orcid: https://orcid.org/0000-0002-6350-1107
  journal: Biometrics
  year: '2023'
  volume: '79'
  issue: '3'
  doi: 10.1111/biom.13769
  start: '2705'
  end: '2718'
repository: https://CRAN.R-project.org/package=ROKET
date-released: '2025-03-04'
contact:
- family-names: Little
  given-names: Paul
  email: pllittle321@gmail.com