Package: RNAseqNet
Type: Package
Title: Log-Linear Poisson Graphical Model with Hot-Deck Multiple
        Imputation
Version: 0.1.5
Date: 2024-02-20
Authors@R: c(person("Alyssa", "Imbert", role = c("aut"), email="alyssa.imbert@gmail.com"),
             person("Nathalie", "Vialaneix", role = c("aut", "cre"), email="nathalie.vialaneix@inrae.fr"))
Maintainer: Nathalie Vialaneix <nathalie.vialaneix@inrae.fr>
Description: Infer log-linear Poisson Graphical Model with an auxiliary
        data set. Hot-deck multiple imputation method is used to
        improve the reliability of the inference with an auxiliary
        dataset. Standard log-linear Poisson graphical model can also
        be used for the inference and the Stability Approach for
        Regularization Selection (StARS) is implemented to drive the
        selection of the regularization parameter. The method is fully
        described in <doi:10.1093/bioinformatics/btx819>.
License: GPL (>= 3)
Depends: R (>= 3.1.0), ggplot2
Imports: igraph (>= 1.0), hot.deck, PoiClaClu, glmnet, methods, utils
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
NeedsCompilation: no
Packaged: 2026-07-03 11:00:39 UTC; root
Author: Alyssa Imbert [aut], Nathalie Vialaneix [aut, cre]
Repository: https://cran.r-universe.dev
Date/Publication: 2024-02-21 02:30:09 UTC
RemoteUrl: https://github.com/cran/RNAseqNet
RemoteRef: HEAD
RemoteSha: 8aa6fcb521e59cd9bbec73dd44a8351801f4c0ab