Package: PheValuator
Type: Package
Title: Rapid Phenotype Evaluation
Version: 2.2.18
Date: 2026-10-7
Authors@R: c(
    person("William J.", "O'Brien", email = "wobrien8@its.jnj.com", role = c("aut", "cre")),
    person("Joel", "Swerdel", email = "jswerdel@its.jnj.com", role = c("aut")),
    person("Martijn", "Schuemie", email = "schuemie@ohdsi.org", role = c("aut"))
  )
Description: Evaluates phenotype algorithms by developing a diagnostic
        prediction model using a set of noisy positives and noisy
        negatives. It can then apply the model to a large cohort to
        create a set of subjects each with a predicted probability for
        the health outcome of interest.  This cohort can then be used
        to evaluate phenotype algorithms through the calculation of the
        necessary performance characteristics - sensitivity,
        specificity, and positive and negative predictive value. Based
        on work by Swerdel (2022) <doi:10.1016/j.jbi.2022.104177> and
        Swerdel (2019) <doi:10.1016/j.jbi.2019.103258>.
License: Apache License 2.0
VignetteBuilder: knitr
Depends: R (>= 4.1.1)
Imports: DatabaseConnector, PatientLevelPrediction (>= 6.0.4),
        FeatureExtraction (>= 2.1.5), SqlRender (>= 1.5.2), dplyr (>=
        0.7.8), methods, ParallelLogger, tibble
Suggests: knitr, rmarkdown, shiny, shinydashboard, DT, htmltools, qpdf,
        testthat, Eunomia, withr, CohortGenerator
URL: https://ohdsi.github.io/PheValuator/,
        https://github.com/OHDSI/PheValuator
BugReports: https://github.com/OHDSI/PheValuator/issues
Encoding: UTF-8
Config/roxygen2/version: 8.1.0
NeedsCompilation: no
Packaged: 2026-10-24 11:25:41 UTC; root
Author: William J. O'Brien [aut, cre], Joel Swerdel [aut], Martijn
        Schuemie [aut]
Maintainer: William J. O'Brien <wobrien8@its.jnj.com>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-10-24 11:17:19 UTC
RemoteUrl: https://github.com/cran/PheValuator
RemoteRef: HEAD
RemoteSha: 65148cdd17c67542b735991051f9990bb48f95e3