Encoding: UTF-8
Package: PINSPlus
Type: Package
Title: Clustering Algorithm for Data Integration and Disease Subtyping
Version: 2.0.10
Date: 2026-09-01
Authors@R: c(person(given = "Hung",
                      family = "Nguyen",
                      role = "aut"),
               person(given = "Bang",
                      family = "Tran",
                      role = "aut"),
               person(given = "Duc",
                      family = "Tran",
                      role = "aut"),
               person(given = "Tin",
                      family = "Nguyen",
                      role = "aut"),
               person(given = "Van-Dung",
                      family = "Pham",
                      role = "cre",
                      email = "dvp0001@wayne.edu"))
Description: Provides a robust approach for omics data integration and
        disease subtyping. PINSPlus is fast and supports the analysis
        of large datasets with hundreds of thousands of samples and
        features. The software automatically determines the optimal
        number of clusters and then partitions the samples in a way
        such that the results are robust against noise and data
        perturbation (Nguyen et al. (2019) <DOI:
        10.1093/bioinformatics/bty1049>, Nguyen et al. (2017)<DOI:
        10.1101/gr.215129.116>, Nguyen et al. (2021)<DOI:
        10.3389/fonc.2021.725133>).
License: LGPL
Depends: R (>= 2.10)
Imports: foreach, entropy , doParallel, matrixStats, Rcpp,
        RcppParallel, FNN, cluster, irlba, mclust, impute
RoxygenNote: 7.3.2
Suggests: knitr, rmarkdown, survival, markdown
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2026-10-10 13:53:50 UTC; root
Author: Hung Nguyen [aut], Bang Tran [aut], Duc Tran [aut], Tin Nguyen
        [aut], Van-Dung Pham [cre]
Maintainer: Van-Dung Pham <dvp0001@wayne.edu>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-09-02 05:20:42 UTC
RemoteUrl: https://github.com/cran/PINSPlus
RemoteRef: HEAD
RemoteSha: 66cfde254d0c58ca51e0c661136f3f41c7d1aaac