NEWS

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MLDS 0.5

• corrected version misalignment in package man page and Description file. fixed escaping of latex characters in .Rd files.

MLDS 0-4.901

• Just a little more compression of vignette!

MLDS 0-4.9

• Extra compression of vignette pdf file

MLDS 0-4.8

• fixed a bug in summary.mlds.bt when standard.scale = FALSE. The values were not correctly computed. (Thanks to Jakob Gruenwald)

MLDS 0-4.7

• compiled with compact-vignettes="both"

MLDS 0-4.6

• changed URL's to DOI's for JSS citations

MLDS 0-4.4

• fixed formatting error in vignette

MLDS 0-4.2

• added argument to plot, lines, points methods to plot difference scales in units of d'. removed some unnecessary triple colons in referencing packages

MLDS 0-4.1

• fixed bug in predict.mlds and predict.mlbs when using newdata argument. mlds now works for triads when only a subset of the data frame is used.

MLDS 0-4.0

• mlds.mlds.df and mlds.mlbs.df changed so that model matrices constructed internally by formula objects and the model.matrix function.

MLDS 0.3-2

• removed LazyLoad from Description moved vignette from inst/doc to vignettes

MLDS 0.3-1 (2011-09-30)

• added glm.meth argument to mlds.mlds.df and mlds.mlbs.df so that other methods could be passed to glm function, such a brglm.fit from the brglm package.

MLDS 0.2-9 (2010-10-01)

• added vignette added Transparency data set

MLDS 0.2-8 (2010-06-15)

• suppressed warnings from boot.mlds, boot.mlbs binom.diagnostics, and simu.6pt and added option no.warn to each of these to turn them back on made the output of boot.mlds and boot.mlbs lists of class "mlds.bt" and added a summary method to extract the means and SDs. These can be specified to be either on the standard or unnormalized scales added defunct function for runSampleExperiment, this being replaced earlier by runQuadExperiment and runTriadExperiment

MLDS 0.2-7 (2010-05-28)

• added function SimMLDS which creates data from a simulated MLDS experiment

MLDS 0.2-6

• typos in Rd files re-ordered ... arguments to optim in mlds.formula method

MLDS 0.2-5 (2009-11-12)

• fixed bug in runQuadExperiment example on man page

MLDS 0.2-4

• added CITATION file to inst directory

MLDS 0.2-3 (2009-09-29)

• Get6pts wasn't taking into account multiple trials with the same quadruples. Fixed now. Get6pts and simu.6pt take a new argument, nrep, which indicates how many sessions (complete sets of quadruples) the data represent.

MLDS 0.2-2 (2009-09-18)

• Method of triads integrated into package. mlds.default has been removed and now there is mlds.mlds.df for the method of quadruples (input objects of class mlds.df or data.frame) and mlds.mlbs.df for the method of triads (objects of class mlbs.df or data.frame) and generating objects of class mlds and mlbs, respectively. RunSampleExperiment changed to RunQuadExperiment and RunTriadExperiment added. The first produces an object of class mlds.df, as the older function did and the latter an object of class mlbs.df complementary methods added for objects of class mlbs.df and class mlbs mlds.formula method works for mlbs.df objects, i.e., triads, too.

MLDS 0.2-1 (2009-08-21)

• Fixed some Rd files that were giving warnings

MLDS 0.2-0 (2009-08-19)

• fixed warnings in mlds.Rd eliminated AIC method, relying on default (suggested by Achim Zeileis) fixed some non ASCII text in Rd files added coef and vcov methods for object of class mlds

MLDS 0.1-8 (2009-05-25)

• modified boot.mlds to use glm.fit so about 2x faster fixed unmatched parenthesis in mlds.Rd fixed bug in runSampleExperiment in which program bombs if observer enters a carriage return instead of a number made runSampleExperiment not bomb if observer enters arbitrary character

MLDS 0.1-7 (2009-01-13)

• added as.mlds.df S3 generic changed df2mlds.df and ix.mat2df to as.mlds.df.data.frame and deprecated both of the former functions.

MLDS 0.1-6 (2009-01-12)

• modified LazyData yes added aspect argument to runSampleExperiment for controlling aspect ratio of graphic display graphic display in runSampleExperiment now opens using dev.new for better platform independence added xlim and ylim arguments to DisplayOneTrial for controlling size of displayed scatterplots fixed some unmatched braces in Rd files

MLDS 0.1-5 (2008-11-23)

• modified default DisplaySize in runSampleExperiment Changed argument N to PntNum in DisplayOneTrial to avoid name conflicts due to partial matching

MLDS 0.1-3

• added function df2mlds.df to coerce data frame from results to object of class mlds.df with appropriate attributes

MLDS 0.1-2 (2008-08-27)

• made mlds generic and added default (for glm and optim) and formula methods. The formula method uses optim.