NEWS
KINSIMU 0.1.3 (2025-12-19)
- Addressed several issues and improved the accuracy of statistical calculations within the package.
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EvaluatePanel(): Corrected the calculation of Het_adjusted (adjusted heterozygosity) to use the standard unbiased estimator formula based on the number of individuals (n_of_indi) rather than the number of alleles. This enhances the accuracy of this population genetics parameter.
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pedsimu(): Fixed a serious bug that would result in incorrect data being passed under the assumption of a maternal mutation
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IICAL(), LRpara(), LRhsip(), LRgpgcam(), logLR():
- --Adjusted default value for
rare parameter: The default value of the rare parameter has been changed from NULL to 0.0001. This provides a more practical default for handling rare alleles without requiring explicit user input in many common scenarios.
- --Added input validation for numeric allele positions when
allelename = FALSE: When the allelename argument is set to FALSE, the function now includes a check to ensure that the provided allele data are of a numeric type, representing allele positions. If the input is not numeric, a clear suggestion is provided to enter allele positions.
KINSIMU 0.1.2-2 (2024-06-14)
- Added a new citation information
KINSIMU 0.1.2 (2024-01-08)
- Added a
NEWS.md file to track changes to the package.
- A new argument "Th" has been added to EvaluatePanel() function, meaning the threshold identifying markers with frequency sum differ significantly from 1 (those with data errors).
- Fixed several bugs in IICAL(), trioPI() and LRgpgcam() functions;
- Added a pdf file containing the instruction of functions in this package as a vignette file;
- Updated the examples to make them more visible.