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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "GRAPE" in publications use:'
type: software
license: GPL-2.0-only
title: 'GRAPE: Gene-Ranking Analysis of Pathway Expression'
version: 0.1.1
doi: 10.32614/CRAN.package.GRAPE
abstract: 'Gene-Ranking Analysis of Pathway Expression (GRAPE) is a tool for summarizing
  the consensus behavior of biological pathways in the form of a template, and for
  quantifying the extent to which individual samples deviate from the template. GRAPE
  templates are based only on the relative rankings of the genes within the pathway
  and can be used for classification of tissue types or disease subtypes. GRAPE can
  be used to represent gene-expression samples as vectors of pathway scores, where
  each pathway score indicates the departure from a given collection of reference
  samples. The resulting pathway- space representation can be used as the feature
  set for various applications, including survival analysis and drug-response prediction.
  Users of GRAPE should use the following citation: Klein MI, Stern DF, and Zhao H.
  GRAPE: A pathway template method to characterize tissue-specific functionality from
  gene expression profiles. BMC Bioinformatics, 18:317 (June 2017).'
authors:
- family-names: Klein
  given-names: Michael
  email: michael.klein@yale.edu
repository: https://cran.r-universe.dev
commit: a2f2f92bdc37cc8d1b8f8e107b1bfc225dd0ab73
date-released: '2019-05-07'
contact:
- family-names: Klein
  given-names: Michael
  email: michael.klein@yale.edu