NEWS
GMCM 1.4 (2019-11-05)
Major changes
- AIC and BIC goodness of fit estimation is now available via the function
goodness.of.fit.
- Added a graphical interface for the package via a shiny application.
Available at online or via
runGMCM() for
a local instance.
- Added
classify() function to ease classification after fitting a general
GMCM.
- Added vignettes and
documentation website via
the pkgdown package.
GMCM 1.3.2 (2019-03-12)
Minor changes
- Hotfix due to new default RNG after R version 3.5.3.
GMCM 1.3.1 (2019-02-14)
Minor changes
- By request,
EMAlgorithm is now exported to the user interface with slight
tweaks. Better docs and examples are also provided.
- Expanded capability of
as.theta() and fixed issue incorrect default axis
labels in plot.theta.
- Fixed broken link in vignette.
- Minor improvements to documentation.
GMCM 1.3.0 (2018-12-15)
Major changes
- Fixed issue with optim wrappers for the likelihood (
vector2theta and
theta2vector) causing the first anchored component to be scaled
slightly incorrectly. Note, fitted results will be changed compared to
earlier versions (although hopefully not much).
- Functions now return a proper
S3 object of class theta and
print.theta(), summary.theta(), and plot.theta() functions have
been made to fit the usually expected generic functions.
- Minor improvements and corrections to documentation.
- Technical changes (with no impact on user interface):
- Updated package to use latest \cpkg{roxygen2} and \cpkg{Rcpp} packages.
- Updated Travis-CI yaml file to
'newly' supported R-language.
- Expanded unit tests and added continuous integration of test coverage with
coveralls.io
utilizing the \pkg{covr} package.
GMCM 1.2.4 (2017-01-13)
Minor changes
- Added vignette.
- Minor tweaks to documentation.
- Updated affiliations.
- Fixed broken links.
GMCM 1.2.3 (2016-03-30)
Minor changes
- Updated citation information and manuscript.
- Minor updates to documentation.
- Patch due to changes in \pkg{testthat} and published manuscript.
GMCM 1.2.2 (2015-08-05)
Minor changes
- Patch due to changes in \pkg{RcppArmadillo}. No visible user changes.
GMCM 1.2.1 (2015-04-20)
Minor changes
- Hotfix due to failure of unit tests on sparc solaris. No visible user
changes.
GMCM 1.2 (2015-04-13)
Major changes
- Added the GMCM package vignette. The article is to appear in the
Journal of Statistical Software.
rtheta has been updated substantially to allow for finer and
more explicit control if needed. Default is the old behavior.- Documentation has improved.
GMCM 1.1.1 (2014-10-06)
Minor changes
- Fixed a small testing issue on CRAN for old R versions.
(Used
anyNA on R versions older than 3.1.0).
GMCM 1.1 (2014-10-01)
Major changes
- This NEWS.Rd file have been added!
- The \cpkg{GMCM}-package is now using the in-source documentation
system \cpkg{roxygen2}.
- The
EStep has been implemented in
Rcpp and thus GMCM now features a faster pseudo EM algorithm.
- \cpkg{GMCM} is no longer dependent on the \cpkg{mvtnorm} package.
\cpkg{GMCM} now features faster simulation of data.
- Functions
rmvnormal and dmvnormal are now exported and
visible to the user. These are now both implemented in \cpkg{Rcpp}
and are faster versions of rmvnorm and
dmvnorm from \cpkg{mvtnorm}.
- \cpkg{GMCM} is now using \cpkg{testthat} for automated
testing. The automated test suite will further be expanded in the
upcoming versions.
- Internal functions are now correctly hidden using the internal
keyword.
- The order of function arguments
verbose and max.ite in
fit.meta.GMCM has been swapped to make it consistent with
fit.full.GMCM. Apologies for any inconveniences.
get.idr is no longer exported and visible to the user.
Use get.IDR to get the local (posterior class probabilities)
and adjusted irreproducibility discovery rates (IDR).- Added Travis Continuous Integration
for R building.
GMCM 1.0.1 (2014-05-29)
Minor changes
pgmm_marginal and other functions in src/GMCM.cpp have
been rewritten to address memory issues. \cpkg{GMCM} should now be more
stable and faster.
GMCM 1.0 (2014-01-31)
Hurray!