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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "FIRM" in publications use:'
type: software
license: GPL-3.0-only
title: 'FIRM: Flexible Integration of Single-Cell RNA-Seq Data'
version: 0.1.2
doi: 10.32614/CRAN.package.FIRM
abstract: Provides functions for the flexible integration of heterogeneous scRNA-seq
  datasets across multiple tissue types, platforms, and experimental batches. Implements
  the method described in Ming (2022) <https://doi.org/10.1093/bib/bbac167>. The package
  incorporates modified 'C++' source code from the 'flashpca' library (Abraham, 2014-2016
  <https://github.com/gabraham/flashpca>) for efficient principal component analysis,
  and the 'Spectra' library (Qiu, 2016-2025) for large-scale eigenvalue and singular
  value decomposition; see 'inst/COPYRIGHTS' for details on third-party code.
authors:
- family-names: Ming
  given-names: Jingsi
  email: jsming@fem.ecnu.edu.cn
  orcid: https://orcid.org/0000-0001-7059-4156
repository: https://cran.r-universe.dev
repository-code: https://github.com/mingjingsi/FIRM
commit: 6e88aee1b0cf55fe3e2507cedac5417926262f40
url: https://github.com/mingjingsi/FIRM
date-released: '2026-02-19'
contact:
- family-names: Ming
  given-names: Jingsi
  email: jsming@fem.ecnu.edu.cn
  orcid: https://orcid.org/0000-0001-7059-4156