Package: EpiExposure
Type: Package
Title: Exposure-Lag-Response Modeling for Plant Disease Epidemiology
Version: 0.1.0
Authors@R: c(person(
  given = "Ricardo Gomes",
  family = "Tomáz",
  email = "ricardogomesagro@gmail.com",
  role = c("aut", "cre"),
  comment = c(ORCID = "0000-0001-7708-4263")),
 person(given = "Emerson M.", 
          family = "Del Ponte", 
          role = "aut",
          email = "delponte@ufv.br",
          comment = c(ORCID = "0000-0003-4398-409X")),
  person(given = "Felipe",
         family = "Dalla Lana",
         role = "aut",
         email = "FDallaLana@agcenter.lsu.edu",
         comment = c("ORCID" = "0000-0002-3112-6197")))
Description: Supports modeling and interpretation of environmental
        exposure-lag-response relationships in plant disease
        epidemiology using distributed lag non-linear models (DLNMs).
        Provides functions for defining complete exposure profiles,
        evaluating model identifiability, summarizing lag-specific and
        period-specific effects, performing sensitivity analyses,
        simulating environmental exposure scenarios, predicting plant
        disease outcomes, quantifying yield and economic losses, and
        evaluating individual and ensemble models. Supports harmonized
        frequentist and Bayesian modeling workflows. Builds on the
        framework implemented in the 'dlnm' package and described by
        Gasparrini (2011) <doi:10.18637/jss.v043.i08>.
Depends: R (>= 4.1)
Imports: dlnm, stats, glmmTMB, brms, spaMM, rlang, mgcv, nlme, ggplot2,
        scales
Suggests: dplyr, tidyr, purrr, tidyselect, INLA, knitr, rmarkdown,
        testthat (>= 3.0.0), pkgdown, readxl, patchwork, metR, bdlnm,
        cowplot, future, sn, future.apply
Additional_repositories: https://inla.r-inla-download.org/R/stable
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
VignetteBuilder: knitr
URL: https://github.com/tomazrg/EpiExposure,
        https://tomazrg.github.io/EpiExposure/
BugReports: https://github.com/tomazrg/EpiExposure/issues
Config/testthat/edition: 3
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-11-06 21:13:42 UTC; root
Author: Ricardo Gomes Tomáz [aut, cre] (ORCID:
        <https://orcid.org/0000-0001-7708-4263>), Emerson M. Del Ponte
        [aut] (ORCID: <https://orcid.org/0000-0003-4398-409X>), Felipe
        Dalla Lana [aut] (ORCID:
        <https://orcid.org/0000-0002-3112-6197>)
Maintainer: Ricardo Gomes Tomáz <ricardogomesagro@gmail.com>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-11-06 18:06:31 UTC
RemoteUrl: https://github.com/cran/EpiExposure
RemoteRef: HEAD
RemoteSha: 58dc552d55160d328e6b2caa62b6f5bad6a0e901