Package: DSGEr
Type: Package
Title: Transcriptional Disruption Score for Gene Sets
Version: 1.3.1
Authors@R: c(
    person(given = "Pingwei", family = "Guo",
           email = "1489413126@qq.com", role = c("aut", "cre")),
    person(given = "Huijuan", family = "Li",
           email = "lihuijuan@xzhmu.edu.cn", role = "aut"))
Description: Computes pathway-level transcriptional disruption scores
        from differential expression p-values using permutation tests
        with Generalized Pareto Distribution (GPD) tail extrapolation
        and false discovery rate (FDR) correction. Reference: Guo P, Li
        H (2026) DSGE: Disruption Score of Gene Expression for Gene-Set
        Enrichment Analysis. <https://github.com/LHJLab/DSGE>.
License: MIT + file LICENSE
Encoding: UTF-8
Imports: data.table, evd, methods, POT, Rcpp
LinkingTo: Rcpp
Suggests: AnnotationDbi, GO.db
Enhances: KEGGREST, org.Hs.eg.db, reactome.db
Config/roxygen2/version: 8.0.0
RoxygenNote: 7.3.3
NeedsCompilation: yes
Packaged: 2026-06-30 13:19:12 UTC; root
Author: Pingwei Guo [aut, cre], Huijuan Li [aut]
Maintainer: Pingwei Guo <1489413126@qq.com>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-06-30 11:56:49 UTC
RemoteUrl: https://github.com/cran/DSGEr
RemoteRef: HEAD
RemoteSha: b6bfdae8b578fc580ef12fff131db99520e20b9c