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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "DESNP" in publications use:'
type: software
license: GPL-3.0-only
title: 'DESNP: Differentially Expressed Single Nucleotide Polymorphism'
version: 0.1.0
doi: 10.32614/CRAN.package.DESNP
abstract: Provides a framework for the identification and analysis of Differentially
  Expressed Single Nucleotide Polymorphisms (deSNPs) using high-throughput sequencing
  data. It enables users to import SNP count data from variant files, perform allele-specific
  read count extraction, and statistically detect SNPs showing significant differences
  in allele expression between biological conditions or sample groups. This package
  contains tools for calculating SNP-index and Delta SNP-index from VCF-derived allele
  depth data with statistical testing and filtering, including sliding-window analysis
  of genomic regions.
authors:
- family-names: Guha Majumdar
  given-names: Sayanti
  email: sayanti23gm@gmail.com
- family-names: Bano
  given-names: Saima
  email: saimabano291019@gmail.com
- family-names: Banerjee
  given-names: Nandita
  email: nanditapatra@gmail.com
- family-names: Tiwari
  given-names: Rahul Kumar
  email: rahultiwari226@gmail.com
- family-names: Sinha
  given-names: Dipro
  email: diprosinha@gmail.com
- family-names: Ghosh
  given-names: Subham
  email: search4aghosh@gmail.com
- family-names: Kumar
  given-names: Sanjeev
  email: sanjeeviivr@gmail.com
repository: https://cran.r-universe.dev
commit: 056b8fae83e010176fe9d2de47bd18e9c1cb88ca
date-released: '2026-03-19'
contact:
- family-names: Guha Majumdar
  given-names: Sayanti
  email: sayanti23gm@gmail.com