Package: CB2
Type: Package
Title: CRISPR Pooled Screen Analysis using Beta-Binomial Test
Version: 1.3.8
Date: 2026-01-29
Authors@R: 
  c(person(given = "Hyun-Hwan", family = "Jeong", role = c("aut", "cre"), email = "hyunhwanjeong@icloud.com"))
Description: Provides functions for hit gene identification and
        quantification of sgRNA (single-guided RNA) abundances for
        CRISPR (Clustered Regularly Interspaced Short Palindromic
        Repeats) pooled screen data analysis. Details are in Jeong et
        al. (2019) <doi:10.1101/gr.245571.118> and Baggerly et al.
        (2003) <doi:10.1093/bioinformatics/btg173>.
Depends: R (>= 3.5.0)
License: MIT + file LICENSE
LazyData: true
Imports: Rcpp, metap, magrittr, dplyr, tibble, stringr, ggplot2, tidyr,
        glue, pheatmap, tools, readr, parallel, R.utils
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat, knitr, rmarkdown
RoxygenNote: 7.3.2
Encoding: UTF-8
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2026-07-03 14:38:56 UTC; root
Author: Hyun-Hwan Jeong [aut, cre]
Maintainer: Hyun-Hwan Jeong <hyunhwanjeong@icloud.com>
Repository: https://cran.r-universe.dev
Date/Publication: 2026-01-29 15:20:14 UTC
RemoteUrl: https://github.com/cran/CB2
RemoteRef: HEAD
RemoteSha: f62732a5337c3f4c154d9cec3606980d0a25259e