NEWS
BreedReliabR 0.1.1 (2026-10-16)
- Add Santosh Patil as a package author for substantial R programming and coding
contribution. Ashutosh Sawarkar remains the sole maintainer.
- Update the maintainer email and add author contact and ORCID metadata.
- Metadata-only release; no statistical, API, or package behaviour changes.
BreedReliabR 0.1.0
First research release
- Freeze the seven-function research API for externally supplied prediction
means and full joint prediction-error covariance.
- Provide M0--M3 comparison, expected selected-set reliability, candidate-level
advancement probabilities, and the relative uncertainty diagnostic Omega(H).
- Add geometric target-environment support diagnostics and an H-curve workflow.
- Clarify assumptions, fixed-k interpretation, Monte Carlo error, RNG behavior,
candidate-major covariance ordering, and the limits of geometric support.
- Retain the simulated maize data and add a reproducible methods/empirical
validation vignette. No G2F raw data are included.
- External evidence: 2024 validation and forward year-held-out 2022 replication
found poor absolute calibration, M2 worst, a small M3 Brier advantage over M1,
and overpredicted selected-set reliability. The corrected L3a 2022 baseline
is canonical; the original denominator error and correction are retained in
the separate audit archive.
Known limitations: probabilities are conditional on the supplied upstream
predictive distribution and target-environment specification. Empirical
calibration is poor in the two validation settings; software release readiness
does not imply calibrated probabilities or guaranteed genetic gain.
BreedReliabR 0.0.3
- Added br_compare() and br_curve() as wrappers around the unchanged H2 core.
- Added range and standardized nearest-environment support diagnostics.
- Added compact S3 print, summary and plot methods for the new result classes.
- Added entirely simulated maize data, a reproducible generation script, and an
executable end-to-end vignette with explicit fit-import and calibration limits.
- Added executable examples to all principal public functions and regression tests.
- Clarified expected-fraction set reliability, Monte Carlo limitations and fixed
TPE assumptions. No core mathematics or H2 tests were changed.