Package: BICORN
Title: Integrative Inference of De Novo Cis-Regulatory Modules
Version: 0.1.0
Authors@R: c(person("Xi", "Chen", email = "xichen86@vt.edu", role = c("aut", "cre")),
             person("Jianhua", "Xuan", email = "xuan@vt.edu", role = "aut"))
Description: Prior transcription factor binding knowledge and target
        gene expression data are integrated in a Bayesian framework for
        functional cis-regulatory module inference. Using Gibbs
        sampling, we iteratively estimate transcription factor
        associations for each gene, regulation strength for each
        binding event and the hidden activity for each transcription
        factor.
Depends: R (>= 3.4)
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1
Suggests: knitr, rmarkdown
Imports: stats
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2026-07-09 09:43:15 UTC; root
Author: Xi Chen [aut, cre], Jianhua Xuan [aut]
Maintainer: Xi Chen <xichen86@vt.edu>
Repository: https://cran.r-universe.dev
Date/Publication: 2018-06-06 09:30:06 UTC
RemoteUrl: https://github.com/cran/BICORN
RemoteRef: HEAD
RemoteSha: acf2011f4a9491073cb2bd2d974626df4045e4f0